Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0748 ATGGCTCCAATGAGTCTCCCACCTGGGTTTAGGTTCCACCCTACAGATGAAGAGCTTGTTGCATACTACTTAGAAAGAAAAATAACAGGACGTTCAATAGAGCTTGATATCATTGCAGAAGTTGATCTATACAAATGTGAACCATGGGATTTGCCAGATAAGTCATTCCTACCTAGCAAAGACATGGAGTGGTATTTTTACAGTCCAAGAGATAGAAAGTACCCAAATGGGTCAAGAACTAATAGAGCAACAAGAGCTGGATATTGGAAAGCTACAGGAAAAGATAGAGCAGTTCATTCTCAAAAGCAACAAGTTGGTATGAAGAAGACATTGGTGTATTACAGAGGTAGAGCACCACATGGGGTGAGAACTAACTGGGTTATGCATGAGTATCGCTTACTTGATTCACTGCCTGCTACATCTCATTCATCTTTGAAGGATTCCTATTCATTGTGTCGAATTTTCAAGAAGACAATTCAAATTCCAACCAAACCAAAAGAAGATGAACAAGCTAATGATGCAAAGAAGGAATTAGTGTGGGTCTCAGAAGAACAAGTATTAAGAAAAGAATCAGGTGGTATTGATGTTTCAAGAGAAATGGAAACCATGGATGAGAAAATTCTCAATCATCATGAACAATATCCTAAATTTCCTTGTGATGCTTCTTCTTCTGATCTTACTCAAGGAACATGTACACCCACTGAAACATGTATAGGAGATGATTTTCAAGCACAATTTGTTTGTGATGAAGCAAATAGTGCAGCTAATTCATACTCAATGGGAATAGGATACCCTTCAAATCTATTTCAGGATATAGAAATACCTATGTATGCAGGCATGCATTACAATTTCTCACACTCACCTTTGGTGATGGAAGATTTTCCACAAATAAACTTACCAGAAACAAAGTCAATGAAGCCAGAAATGATTGGTGATTGCATGTTATATGACAGATATAGGGACTGTATGACTGGAACATTAGAAGAAATCATCTCTCTGTGCTCCTCTCAAGACAATTCAGTTGCTTTGCCAATGCTATAA 1041 0.3766 MAPMSLPPGFRFHPTDEELVAYYLERKITGRSIELDIIAEVDLYKCEPWDLPDKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVHSQKQQVGMKKTLVYYRGRAPHGVRTNWVMHEYRLLDSLPATSHSSLKDSYSLCRIFKKTIQIPTKPKEDEQANDAKKELVWVSEEQVLRKESGGIDVSREMETMDEKILNHHEQYPKFPCDASSSDLTQGTCTPTETCIGDDFQAQFVCDEANSAANSYSMGIGYPSNLFQDIEIPMYAGMHYNFSHSPLVMEDFPQINLPETKSMKPEMIGDCMLYDRYRDCMTGTLEEIISLCSSQDNSVALPML* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0748 346 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Lan5g0748 346 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Lan5g0748 346 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Lan5g0748 346 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Lan5g0748 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 167 - -
Lan5g0748 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0748 Lan-Chr5 19154581 19158940 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0748 1 332 NAC Transcription Factor Family AT1G54330 52.239 4.88e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan5g0748 NAM 4.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0748 - - gmx:100808325 606.29