Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0735 ATGATGCCAAGTAGTGGACAATTAACAGTTCCTCCGGGCTTCAGGTTCCACCCAACTGATGAAGAGCTTCTATACTATTACCTGAGGAAAAAAGTTTCTTATGAAGCCATTGATCTTGATGTCATAAGAGAAGTGGATCTGAACAGGCTTGAGCCTTGGGACCTCAAAGATAAATGTAGGATTGGGTCAGGACCTCAGAATGAGTGGTATTTCTTCAGCCACAAGGACAAGAAATATCCAACAGGAACTCGAACAAATCGAGCAACAACAGCTGGATTTTGGAAAGCAACTGGAAGAGACAAAGCCATTTACCATAGCAATTCTAAGAGGATTGGGATGAGGAAAACCCTAGTGTTCTACACTGGTCGTGCTCCTCATGGCCACAAGACCGAGTGGATCATGCATGAGTATCGTCTTGATGAAGATGATGCTGAGGTTCAGGAAGATGGTTGGGTTGTTTGCAGGGTTTTCAAAAAGAAAAACCAAAATAGAAGTTACCAACAAGAAATTGAAGAAGAAGATCATCACTTCACTCACATGAGAACAACTGGTCCTTCCCAAATTCTAGAGCCAAAACATCATCACATGCAAGGACTCTATGATTACAACAACTTTGATGGGTCACTACACTTGCCACAGTTGTTTAGTCCAGAATCAGCTATAGCACCAACTCATTCCATGGCTTCACCAATGAATGCCATGGACATCCTTGAATGCTCTCAAAACTTGTTGAGGCTTACAACAACTGATGCATGTGGACATAATCTTATGCATCAACAACAACAACATGGAGAGAGGTTCAATGGTGATTGGTCATTCTTGGATAAGCTCCTAGCATCACATAATAATAACCCTCCTACCCATCACGATGCAGCACCTTCTGTTGGAATTTCTGCTCAGAAATTTCCATTTCATTACCTTGGCTGTGACACTCATGATATTATGAAATTTTCCAAGTAA 960 0.4156 MMPSSGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNRLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHSNSKRIGMRKTLVFYTGRAPHGHKTEWIMHEYRLDEDDAEVQEDGWVVCRVFKKKNQNRSYQQEIEEEDHHFTHMRTTGPSQILEPKHHHMQGLYDYNNFDGSLHLPQLFSPESAIAPTHSMASPMNAMDILECSQNLLRLTTTDACGHNLMHQQQQHGERFNGDWSFLDKLLASHNNNPPTHHDAAPSVGISAQKFPFHYLGCDTHDIMKFSK* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0735 319 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Lan5g0735 319 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Lan5g0735 319 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Lan5g0735 319 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 285 - -
Lan5g0735 319 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
Lan5g0735 319 PANTHER PROTEIN SOMBRERO 6 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0735 Lan-Chr5 18762359 18766194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0735 2 319 NAC Transcription Factor Family AT1G79580 53.543 9.20e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan5g0735 NAM 9.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0735 - - gmx:100789606 562.762