Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0726 ATGGAAGCCAAAGGTGGAGAAGTGAGAAGGTTGCATATCATTTACTTCCTCAGCCACATGGGTGGTCGTGCAGAACATCCTCATCTCATTCGTGTTCTTCATCTAACTCGTAACGGGGTTTATCTCCGAGATGTTAAGAGATGGCTAGGGGAATTGAGAGGAAAAGACTTGCCTGAAGCATTTGCTTGGTCCTACAAGAGGTACAAGAGTGGATATGTGTGGCAGGACCTGTTTGATGATGACCTCTTAACTCCCATTTGTGACAATGAATACGTCCTCAAAGGATCACAAATCCACCCTACTACTTTTGAATCTCATTCACCTGATGTAAAGAAAACTTCTACTGATATACTGTCTGAGAAGAAATCACCTCAAGTACAAGTTGCAGATAAGCACCAACTGCACCAGCAGCATCCATCTCTTGAAGAACAATCTCGAATTCACGAATCGAAAACGGATACTCCGACAAAAGTGTCATCAGAAATCAGCCAAGATTCATCAGTGAGTGATGAATATGATGAGTCTTCTAAGGTTGAAGAAGAGAAGCCTTTGTGGACAGGCAAAGAGAGTTTCAATGAAGAGAACCAAGAGAAATTAGAGAACTTATCATTCCCTTCTTTGTATCACAATCTTTTGACTAAGAATTGTAACAAAGATGATCACAATAAAACTGATACAGCAGAGTATTCCTTTTCTTCGGCTTCGTCATCATCTTCATCTCAGTCCTCTTATACTAAGCTCAGAAGCAATTCTACTAGAGTTTCGAGCGTATTTCGCAATTGGATTTCTTGTAGTACTGTTGAAACAAATGATGCAGCCTTGGTCCTGATGAATTCTCCATTAAAAGGTATCTCCAAGGAGCCTAAAAACAAACCAGAAAATAAGGCCCAGTTATGTAAAGGAGACTCATTGGGAGGATCATCAAGGTGTTTTGGTACTTCATGGAATCATCATCACCAGCAAGAATATGGAGATAGAAAAAGCTGTGATGGAGGGGAAACAAACATGAGAAGTAAAAAGCTAGGTGACTTCATGAATCAAACTACTAAAAAATCATTTCGTAGACCGAGTTGCTCGCAATGTGGGAAATCATTCCAGCCAGAGAGAATGCACAAACACATGAAGTCATGTAGAGGAATGAAGGCATTGGGAATGTCTGCTTCAACAACTGCTGAGAAGACACAGACTCAAAGATCAACTTTCTCCCATACACCATACTTTTTGACCAACTAA 1233 0.4047 MEAKGGEVRRLHIIYFLSHMGGRAEHPHLIRVLHLTRNGVYLRDVKRWLGELRGKDLPEAFAWSYKRYKSGYVWQDLFDDDLLTPICDNEYVLKGSQIHPTTFESHSPDVKKTSTDILSEKKSPQVQVADKHQLHQQHPSLEEQSRIHESKTDTPTKVSSEISQDSSVSDEYDESSKVEEEKPLWTGKESFNEENQEKLENLSFPSLYHNLLTKNCNKDDHNKTDTAEYSFSSASSSSSSQSSYTKLRSNSTRVSSVFRNWISCSTVETNDAALVLMNSPLKGISKEPKNKPENKAQLCKGDSLGGSSRCFGTSWNHHHQQEYGDRKSCDGGETNMRSKKLGDFMNQTTKKSFRRPSCSQCGKSFQPERMHKHMKSCRGMKALGMSASTTAEKTQTQRSTFSHTPYFLTN* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0726 410 MobiDBLite consensus disorder prediction 135 155 - -
Lan5g0726 410 MobiDBLite consensus disorder prediction 387 410 - -
Lan5g0726 410 PANTHER F3F20.2 PROTEIN 3 398 - -
Lan5g0726 410 MobiDBLite consensus disorder prediction 120 189 - -
Lan5g0726 410 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 3 398 IPR010369 -
Lan5g0726 410 MobiDBLite consensus disorder prediction 170 189 - -
Lan5g0726 410 Pfam Protein SOSEKI, plant 12 253 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0726 Lan-Chr5 18500250 18503873 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan5g0726 DUF966 2.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0726 - - gmx:100785001 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0046 19 346099 349313 Lan5g0726 5 18500250 18503873 LSH