Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0717 ATGTCTTTCAAAAACAAGAATGGAGATGACAAAGAGATTTACAATGACTACAAGGAGGACGCCACCGTCACACGTCGTTCTTCTGGTCGTCCTCGGGGCTCAAAAAACAAACCAAAACCACCAATTATTATAACTACAAAGAGCCCTAAAGCAATCAAAAGTCATATCTTTGAGTTTGCAAGTGGAGTCGACATTGCTGAAAGCTTGCTTTGCTTTGCTAGCACCCGCCAAAGAGGATTATGTGTTCTTAGTGCCACTGGAATTGTTACCAACGTCACTCTTCGGCAAGTGGATGGCACCGTCATAGTGTTGCATGGCCAATTTAATATAATAATGATGAATGGTTTGTTTTTTCCATTAGGATCATCCCCATCTAGATTAATTGTTTACCTTGGCAAAGATCAGGGGAGAATGATCGGCGGCACGGTGGTGGGACCATTGGTGGCTTCAGGATCAGTTATGGTAATGGCAACTAGTTTTGCTAATGCAATCAATGTGAGATTACCTTTACTTGATAAGGATAATGACGATGACGAGCAAAGTTGTGGTTGTGGTAACGTCGATATTTCTTCTCTAAAGAAGTAA 585 0.4154 MSFKNKNGDDKEIYNDYKEDATVTRRSSGRPRGSKNKPKPPIIITTKSPKAIKSHIFEFASGVDIAESLLCFASTRQRGLCVLSATGIVTNVTLRQVDGTVIVLHGQFNIIMMNGLFFPLGSSPSRLIVYLGKDQGRMIGGTVVGPLVASGSVMVMATSFANAINVRLPLLDKDNDDDEQSCGCGNVDISSLKK* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0717 194 CDD DUF296 53 160 IPR005175 -
Lan5g0717 194 ProSiteProfiles PPC domain profile profile. 49 183 IPR005175 -
Lan5g0717 194 PIRSF ESCAROLA 2 191 IPR014476 GO:0003680
Lan5g0717 194 SUPERFAMILY AF0104/ALDC/Ptd012-like 50 169 - -
Lan5g0717 194 MobiDBLite consensus disorder prediction 1 26 - -
Lan5g0717 194 MobiDBLite consensus disorder prediction 1 42 - -
Lan5g0717 194 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 15 177 IPR014476 GO:0003680
Lan5g0717 194 Gene3D - 52 173 - -
Lan5g0717 194 Pfam Plants and Prokaryotes Conserved (PCC) domain 54 161 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0717 Lan-Chr5 18262449 18263033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0717 20 188 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 51.955 2.83e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0717 - - lang:109347191 214.542