Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0705 ATGTCTCAAAAGACAGAAAAAGAAGAAACTGAATTCAAGGTTGTTCCTGAAACCATAACCACCTGTATCAACAATTGTGGCCTCACCGGTAACCCTACAACTAACAACATGTGTCAGAACTGCTTCACCGCCACCACGGTTACCAACGTAATCTCGCCTCCTTCTTCTAGATCTGTCACCGGAAACGGAGACGGTGTTGTTTCTTGTTCGCGGAAGAGATCTTATACGGAGCAACGTGATTGTGATGGAATTGAAGAAACGGCGCCGTGTGAGGTTAAGCGTGTTGTGAATAGGTGTTCAGGTTGTCGGAGGAAGGTTGGTCTCGCCGGATTTAGGTGCCGGTGCGGTGAGGTTTTTTGCGGCGAGCATCGATATTCTGATAGACATGATTGTAGCTATGATTACAAAGGTGCTGGTAAAGAAGCTATTGCTAGAGAGAACCCTGTGGTTAGAGCTGCAAAGATTGTTAAGGTTTGA 477 0.4612 MSQKTEKEETEFKVVPETITTCINNCGLTGNPTTNNMCQNCFTATTVTNVISPPSSRSVTGNGDGVVSCSRKRSYTEQRDCDGIEETAPCEVKRVVNRCSGCRRKVGLAGFRCRCGEVFCGEHRYSDRHDCSYDYKGAGKEAIARENPVVRAAKIVKV* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0705 158 Pfam AN1-like Zinc finger 99 136 IPR000058 GO:0008270
Lan5g0705 158 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 22 48 - -
Lan5g0705 158 ProSiteProfiles Zinc finger AN1-type profile. 93 139 IPR000058 GO:0008270
Lan5g0705 158 Gene3D - 1 61 - -
Lan5g0705 158 ProSiteProfiles Zinc finger A20-type profile. 16 50 IPR002653 GO:0003677|GO:0008270
Lan5g0705 158 Pfam A20-like zinc finger 22 42 IPR002653 GO:0003677|GO:0008270
Lan5g0705 158 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 158 - -
Lan5g0705 158 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 1 158 - -
Lan5g0705 158 SMART AN1_Zf_4 99 136 IPR000058 GO:0008270
Lan5g0705 158 SUPERFAMILY AN1-like Zinc finger 87 152 IPR035896 -
Lan5g0705 158 Gene3D - 72 154 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0705 Lan-Chr5 17657351 17658176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0705 16 158 C2H2 Transcription Factor Family AT3G52800 32.203 4.04e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0705 - - pvu:PHAVU_005G036400g 214.927