Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0678 ATGGCTTATCGACGTAGTCTATTGATAAGAGGGAACCTAGATCGGAAGTGCCACCCGTCTCTCAGTTATGTTATCCATAGCGATGAAAGGAAACACGAAAACCCAGATGAAAAATCATCTTCAGTAGGCATTAGTAGTTTTATCCAAACAAGGTCCTTTGGTAGCTCTCTTAATGGATCTATGGGGTTCGGTACCTCTTCTCGAGATAGAATGCTTTCGAACAGATTCCTTTCTCCGTGCTCTGGGTATAGTTTCTGCCGGTATATGTCAACAGTCAATCAGGGGTCAGATAATATTGATATAATAACTGATGTAGCAGAGGTTCTTTCTGACAAAACTATGGAAGCTGTAGCTTCTCAGGCTCCCATTGTTAATGAAGTTGCAATTGCTGCTGCTGATTCATTTTTACCCGTAAAGTTCTTGCAGTACACTATAGATGCTGTGCATTGCTCCACTGGCTTAAACTGGTGGGCAGCCATTGTTCTAACAACCTTTGTGATTCGGTGTGCAACAGTTCCACTCTTAATAAATCAACTTAAGGCCACTTGTAAGCTTACGCTAATGAGGCCTAAGATGGAGGCGATAAGGGAACGGATGCAAGATCAGGCTATGGATCCTGCAGCTGTTGCGGAAGGTCAGAGGGAATTCAAGAGGCTATTCAATGAATATGGTGTGAGTCCATTTACGCCATTGAAAGGGCTCTTTATTCAAGGTCCTGTATTTGTCAGTTTTTTCCTTGCGATAAACAATATGGCTGAGAAGGTGCCATCATTTAAGCAAGGAGGAGCCTTCTGGTTTATGGATCTCACCACTCCAGATACCTTATACGTTCTTCCAGTTTTGACTGCGTTATCATTCTTACTAACAGTAGAGTGTAATATGCAAGAAGGCTTGGAAGGAAATCCTATGGCTGGCACCATGAAAAATGTCTCTAGGGGTCTTGCTGTTATTACAGTTCCTTTTACCATGGGATTTCCAAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCGCTTGTGTATGGACTTGTGCTTAAAGTTCCTGGGGTAAAGAAAACTTTGGGTCTTCCTGAAATGCCTGCAGCAGCACCTGTTACCAGTGCTCCACAATCTCCCTTTTCTATATTTCCAGCACTGAAAAAAGCTGTTTCTGTGACAAATGGGTCAAGTTCATTGCCAGATGAACCATCAAAACCTTCAGAGAAAAAAATATCTTCTTCTTCTGTTATCAGTCAAAGACTTAGAAGTCTACAGAAACAAGTGAAAGGAAGAAAGAAAAGCAACAAAAAGTGA 1299 0.4134 MAYRRSLLIRGNLDRKCHPSLSYVIHSDERKHENPDEKSSSVGISSFIQTRSFGSSLNGSMGFGTSSRDRMLSNRFLSPCSGYSFCRYMSTVNQGSDNIDIITDVAEVLSDKTMEAVASQAPIVNEVAIAAADSFLPVKFLQYTIDAVHCSTGLNWWAAIVLTTFVIRCATVPLLINQLKATCKLTLMRPKMEAIRERMQDQAMDPAAVAEGQREFKRLFNEYGVSPFTPLKGLFIQGPVFVSFFLAINNMAEKVPSFKQGGAFWFMDLTTPDTLYVLPVLTALSFLLTVECNMQEGLEGNPMAGTMKNVSRGLAVITVPFTMGFPKAIFCYWITSNLFSLVYGLVLKVPGVKKTLGLPEMPAAAPVTSAPQSPFSIFPALKKAVSVTNGSSSLPDEPSKPSEKKISSSSVISQRLRSLQKQVKGRKKSNKK* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0678 432 MobiDBLite consensus disorder prediction 404 419 - -
Lan5g0678 432 Pfam 60Kd inner membrane protein 156 345 IPR001708 GO:0016021|GO:0032977
Lan5g0678 432 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 155 345 IPR028055 -
Lan5g0678 432 PANTHER OXA1 72 406 IPR001708 GO:0016021|GO:0032977
Lan5g0678 432 MobiDBLite consensus disorder prediction 388 432 - -
Lan5g0678 432 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 72 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0678 Lan-Chr5 16840134 16850330 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0678 136 354 Chloroplast and Mitochondria Gene Families AT2G28800 25.764 2.48e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0678 K03217 - gmx:100817052 637.106