Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0675 ATGCTTAACAAAAACAATAGCGACAAAGACAATACCGTCACACGCCGCTCTTTTGGTCGTCCTCGGGGCTCAAAAAATAAACCGAAACCACCAATTGTTGTAACCAGAGTGAGCCCCAGCGCATTCAAAAGCAATGTCTTTGAGTTTGCAAGTGGAGTCAACATTGCTGAAAGCTTGCTTTGCTTTGCTAGCACCCATCAAAGAGGATTATGTGTTCTTAGCGCCACTGGAACTATCACTGATGTCACTCTCCAGCAAGGAGATGGCACTAACATGGTGTTTCGTGGCCAGTTTGGTATAATAATTATGAATGGTTTGTTTGTTCCACCAGGATCATCCCCATCTGGATTAACTAGTTTAACTGTTTACCTCGGTAGAGATCATGGAAGAATGATTGGAGGAATGGTGGTGGGACCGTTGGTGGCTTCAGGACCTGTTATGGTAATGGCTGCTACTTTTGCTAATGCAATCTATGTGAGAAACCCTTTATCCAATAACCATAATGATGAGGATGGGTTGTTAGGCGGTTTTGGTGGTGGCGATGATGGCAACTATAATTCTTTTGGAAAGAAGGGAGGTAGTTCTTCAAAAATGTGTAACTAG 603 0.4328 MLNKNNSDKDNTVTRRSFGRPRGSKNKPKPPIVVTRVSPSAFKSNVFEFASGVNIAESLLCFASTHQRGLCVLSATGTITDVTLQQGDGTNMVFRGQFGIIIMNGLFVPPGSSPSGLTSLTVYLGRDHGRMIGGMVVGPLVASGPVMVMAATFANAIYVRNPLSNNHNDEDGLLGGFGGGDDGNYNSFGKKGGSSSKMCN* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0675 200 SUPERFAMILY AF0104/ALDC/Ptd012-like 40 164 - -
Lan5g0675 200 ProSiteProfiles PPC domain profile profile. 39 176 IPR005175 -
Lan5g0675 200 PIRSF ESCAROLA 2 199 IPR014476 GO:0003680
Lan5g0675 200 MobiDBLite consensus disorder prediction 1 32 - -
Lan5g0675 200 CDD DUF296 46 153 IPR005175 -
Lan5g0675 200 Pfam Plants and Prokaryotes Conserved (PCC) domain 46 154 IPR005175 -
Lan5g0675 200 Gene3D - 43 170 - -
Lan5g0675 200 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 176 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0675 Lan-Chr5 16818890 16819734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0675 14 163 AT-hook Motif Nuclear Localized (AHL) Family AT3G04570 51.250 1.71e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0675 - - lang:109347191 363.229