Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0661 ATGAATAATTGGTTAGGGTTCCCTTTTACACCTCACTTGAGGATTGATGAAGATTTTGGGAGAGAAAACCAAGACCATGGAGGAGGAGGATCATATCATCCTCATCATCACTTATCTGTTATGCCTTTGCACTCTGATGGTTCTCTTTGTGTTGCTGACTCATTTGGGCACCATTCAGCTCCACCTCAAGAGTGGAGATATGATAATGCAATAGGTGGAGGTAATTCAAGTGAAGAAGGTCCAAAGCTTGAAGACTTCTTGGGTTGCTACTCAAACTCCCCTCTTGCTGAAACCAAAGTCTTTTGCCAACAAGGCACTACAGACCAACATGACCGAAACCGAAACCAAAACCAAAACCAAAACATTTCAAAAATTAATGTTAATATGACACCAAGCTTTAGCACCAACAACAATACTGAGATTGAAACTAGGGAGAATAATAACCTCACAAACCATTCTTCTATGATCCAATCTTTTCATGCATATAATGATAGTAGAACACATGCCTTAATCCCCAACAACAATGGCATGTACAAGTCATGGTCGCAACAAACTCAGTTTTCTGATGCAACAAAACAACCTTCAGCTGAGGCAAATGGGTGTAACTTCCAGTCTTTGAATTTGACTATGAGTCCCACTATTCAAAATAAGGTGGGTGCAATTTCACCTTTGCAAGCTGATGATGATACTCGAAAACGTTCCATAGCCAAAGCTCAAGCTAGGGAACCTGTGCCTCGCAAATCTATTGATACATTTGGTCAGAGAACTTCCCAATACCGTGGTGTGACAAGGCATAGATGGACTGGGAGATATGAGGCTCATTTGTGGGATAATAGCTGCAGAAAGGAAGGGCAAACAAGGAAAGGAAGACAAGTTTACCTTGGTGGTTATGACAAGGAAGAAAAAGCAGCAAAGGCGTATGACTTAGCTGCACTCAAGTATTGGGGTCCAACAACTCACATAAATTTCCCTTTAAGCACTTATGAGAAAGAACATGAAGAGATGAAGCACATGAGCAGGCAAGAATTTGTGGCTAATTTAAGAAGGAAGAGCAGTGGATTTTCAAGAGGGGCCTCTGTCTATAGAGGAGTAACAAGACACCATCAACATGGAAGGTGGCAGGCTCGGATCGGAAGGGTTGCTGGAAACAAGGACTTGTATCTTGGTACATTCAGTACACAAGAAGAAGCTGCTGAAGCATATGATATAGCAGCAATCAAGTTCAGGGGAACAACTGCTGTGACCAACTTTGACATTAGTAGGTATGATGTAAAGAGAATTTGCTCAAGCTCAACTCTAATTGCGGGTGACCTTGCGAAACGGTCTCCAGAAGACTCAGCTCCCGCTGCGGCTGACTCCGAGGACTTTAATTCATCGACATCTTCTCAGCCAACTCCTTTGGCTATAACCGAGAGTGAACGCTCCGAGGAATTGTCAAGCATGGTGTTGAATGCCAACTGTGATGAGCAGGCAGTGACCGAGAGTGGAAACGCCAACAATGTATCTGAATCATCGCAAGAGTTTTTACCAAGCAACAAGAATGAGTTGAACCCTCAAAGTCCTAAGTCTTCTGTGGGATTGCCCAATGAGTTTGGGGTGAGTGGAGCAGATTATGGACATGGGTACTTCACACTACAAGGACCAAAATATGATGATGATGATGGAAACAATGAAAATGACCACATGAACAACAACCGTATTGAAAATTTGGGGTTGGTTAATCAAGTTCCTATGTTTGCTTTGTGGAATGAATGA 1755 0.4256 MNNWLGFPFTPHLRIDEDFGRENQDHGGGGSYHPHHHLSVMPLHSDGSLCVADSFGHHSAPPQEWRYDNAIGGGNSSEEGPKLEDFLGCYSNSPLAETKVFCQQGTTDQHDRNRNQNQNQNISKINVNMTPSFSTNNNTEIETRENNNLTNHSSMIQSFHAYNDSRTHALIPNNNGMYKSWSQQTQFSDATKQPSAEANGCNFQSLNLTMSPTIQNKVGAISPLQADDDTRKRSIAKAQAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEEKAAKAYDLAALKYWGPTTHINFPLSTYEKEHEEMKHMSRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTTAVTNFDISRYDVKRICSSSTLIAGDLAKRSPEDSAPAAADSEDFNSSTSSQPTPLAITESERSEELSSMVLNANCDEQAVTESGNANNVSESSQEFLPSNKNELNPQSPKSSVGLPNEFGVSGADYGHGYFTLQGPKYDDDDGNNENDHMNNNRIENLGLVNQVPMFALWNE* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0661 584 MobiDBLite consensus disorder prediction 493 528 - -
Lan5g0661 584 MobiDBLite consensus disorder prediction 439 475 - -
Lan5g0661 584 CDD AP2 257 326 IPR001471 GO:0003700|GO:0006355
Lan5g0661 584 MobiDBLite consensus disorder prediction 104 123 - -
Lan5g0661 584 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 43 513 - -
Lan5g0661 584 Gene3D AP2/ERF domain 257 326 IPR036955 GO:0003700|GO:0006355
Lan5g0661 584 Gene3D AP2/ERF domain 360 420 IPR036955 GO:0003700|GO:0006355
Lan5g0661 584 MobiDBLite consensus disorder prediction 452 475 - -
Lan5g0661 584 ProSiteProfiles AP2/ERF domain profile. 258 324 IPR001471 GO:0003700|GO:0006355
Lan5g0661 584 ProSiteProfiles AP2/ERF domain profile. 360 418 IPR001471 GO:0003700|GO:0006355
Lan5g0661 584 Pfam AP2 domain 359 410 IPR001471 GO:0003700|GO:0006355
Lan5g0661 584 Pfam AP2 domain 258 316 IPR001471 GO:0003700|GO:0006355
Lan5g0661 584 SUPERFAMILY DNA-binding domain 257 326 IPR016177 GO:0003677
Lan5g0661 584 SUPERFAMILY DNA-binding domain 359 420 IPR016177 GO:0003677
Lan5g0661 584 MobiDBLite consensus disorder prediction 493 527 - -
Lan5g0661 584 SMART rav1_2 258 330 IPR001471 GO:0003700|GO:0006355
Lan5g0661 584 SMART rav1_2 360 424 IPR001471 GO:0003700|GO:0006355
Lan5g0661 584 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 43 513 - -
Lan5g0661 584 CDD AP2 359 420 IPR001471 GO:0003700|GO:0006355
Lan5g0661 584 PRINTS Ethylene responsive element binding protein signature 259 270 IPR001471 GO:0003700|GO:0006355
Lan5g0661 584 PRINTS Ethylene responsive element binding protein signature 400 420 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0661 Lan-Chr5 15799765 15804170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0661 1 447 AP2-EREBP Transcription Factor Family AT1G72570 50.325 1.24e-135 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Lan5g0661 AP2 7.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0661 K09285 - gmx:100809762 823.928