Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0659 ATGGAAAACATGAAAAAGAGAAAATTTTCTGAATTGTTGTCAGAGCTTATAGTTTTGGCTGATGAGGTTGCCTGTTTTGCTAAGAACTCTGACATGGAGGTAGATATTTTTGCTGAGTTTGCCATGTTGGTTGAGAAATTCTCTCCAATCTTCGATGACTTGAGGGATAAAGGTGCCTTCATGGACAAGCCACCTATTAGAAAATCGTTGGAATCACTTGAGAATGAGCTAAGGCGTGCTAAAGCTTTGATAAGAAGCACCAATTTGAGACAACCGATTAAGCAAATTGAGGACATAACTCATGATATTGGTCGATCATTAGGTGTTCTTCTTGTAGCCAGCCTTGAAATGTCCACGGATTTTAGAGAAAAGATTGGTAAATTGCAAAGACAGTTGATGAATGCAAGGTTTGCTGACAATTGGAGTGTAACTTCAAGTCCAATATCAGAGTCTGTTAGTAGTGATAGGAAGGTTAATTGGGAAATAGAAGAGGAAGTAATTAATGTTACTATTGGTGATGTTGTTTTGCAACTTAAGAATGGCAATGATGAAGATTTTGCGGTTGCACTTTTGAGACTAAAGGAGTTCATTAGGAATGAGAATTACCATAGTGGTTTAATTAATGAAGAGGCAATTGTTGCCATTCTCTTCAATCGTCTCGGTTCATGTCAGGCAAACAACAGGCTGGCCATCATTCAATTGTTAAGAAGTATTTCCTTCGCAAATGAAGAGAAAAAGGAGAAGATGGCAGATATTGAGTCTTTATCCAAAGTGGTGAAGTCTTTGACACGGGATGCACAAGAGAGGAGAGAAGCAGTGGGGCTGTTGCTTGAACTCTCTATCCTTGCTGAAGTTCGGCGGCGGCTTGGAAGAATTAAGGGGTCTATTGTTATGTTAGTTGCTATCCTTAATGCAGATGACCCCATTGCTTCACATGATGCAGCAAAGTTATTGGAAATATTGTCTAGTAATACTCAAAATGCACTTCATATGGCAGAGGCTGGTTACTTTAGGTCATTAGTGCAGTATTTGAAGGAAGGATCCGACATGAATAAGATCCTAATGGCAACAGCACTTTCTAGGTTGGAACTTACTGATCACAGCAAACTTGCCCTTGGAGAAGATGGGGCAATTGAGCCCCTTGTCAAAATGTTTAATTCTGGCAAATTTGAGTCCAAGTTCTCAGCTCTCAATGCACTGCAAAATCTGTCTACCTTGACTGAAAATGTGCAACGCTTGATCAAATCCGGAATTGTACGGTCCCTGCTGCAACTTCTTTTCTCTGTAACATCTGTGCTTATGACTCTACGGGAGCCTGCGTCAGCTATTCTTGCTAGAATTGCTCAGTCAGAATCCATTCTTATTAATCAAGATGTGGCTCAGCAGATGCTTTCACTTTTGAATCTTTCCAGCCCTATAATTCAAAGTCATCTACTAGAAGCACTAAATAGCATAGCTTCCCATCCTGGCGCCTCCAAATTGAGAAGAAAAATGAAGGAAAAAGGTGCACTTCATCTACTCTTACCCTTCCTAAAGGAAAATAACACTAAAATCCGGAGTAAGGTCTTGCACTTGCTCTACACTCTATCCAAAGATCTAACAAATGAACTGGCTGAACATCTTGATGAAGCTTATCTTTTCATACTTGTTAATATTGTCGCATCATCAACATTGGCGAGTGAAAAAGCTGCTGCCGTTGGCATACTAAGTAACCTTCCGGCTATTGACAAAAATGTGACAGACATAATGAAGACTGCAAATTTTCTGCCCATTTTGATATCCATTATGAATTCTAGCATAGGAAGTAACTCACCGTCGACAACTAGTTTTGCTGAGAGTGCTGCATGTGTTATTATACGCTTCACAAATTCCTCTGACAAGAAACTACAACTTTATTCAGCAGAACATGGTGTATTTCCATTGCTCGTAAAACTGCTCTCAAGTGGTTCAGCAATCACAAAATCTAAAGCTGCTACTTCTCTTGCTCAACTATCACAAAATTCTCTGACTCTTAGGAAGTCCAGAAAGTCAAGGTGGTTGTGTGTACTGCCCTCAATGGATGCATATTGTGGAGTTCACGGTGGCAACTGCTTTGTCAACAGCACATTTTGTCTAGTAAAGGCAAGTGCTGTGCGTCCACTGATCCGGATATTGGAAGATAAGGAGAGGGAAGCAGTCGAAGCGGCTCTGATTGCCCTTTCAACTCTCTTGCAAGATGAAATTTGGGAAGGTGGTGTCAATTCCATTGCTAAATTTTCCGGGGTACAGGCTATTATAAAGTGTCTTGAATTAGAGGATGCAAAGGTTCAAGAGAAAGCTATATGGATGCTGGAAAGAATATTCCGGGTCGAAGAGTACAGAGTAAAGTATGGAGAATCTGCTCAGGTGGTTCTCATTAATATAGCCCAAAAGAGTGATTCTAGATTGAAGTCAATAGCAGCAAAAGTATTAGCAGAGCTGGAACTCTTGCTAGCTCAATCAAGCTACTTCTGA 2493 0.4039 MENMKKRKFSELLSELIVLADEVACFAKNSDMEVDIFAEFAMLVEKFSPIFDDLRDKGAFMDKPPIRKSLESLENELRRAKALIRSTNLRQPIKQIEDITHDIGRSLGVLLVASLEMSTDFREKIGKLQRQLMNARFADNWSVTSSPISESVSSDRKVNWEIEEEVINVTIGDVVLQLKNGNDEDFAVALLRLKEFIRNENYHSGLINEEAIVAILFNRLGSCQANNRLAIIQLLRSISFANEEKKEKMADIESLSKVVKSLTRDAQERREAVGLLLELSILAEVRRRLGRIKGSIVMLVAILNADDPIASHDAAKLLEILSSNTQNALHMAEAGYFRSLVQYLKEGSDMNKILMATALSRLELTDHSKLALGEDGAIEPLVKMFNSGKFESKFSALNALQNLSTLTENVQRLIKSGIVRSLLQLLFSVTSVLMTLREPASAILARIAQSESILINQDVAQQMLSLLNLSSPIIQSHLLEALNSIASHPGASKLRRKMKEKGALHLLLPFLKENNTKIRSKVLHLLYTLSKDLTNELAEHLDEAYLFILVNIVASSTLASEKAAAVGILSNLPAIDKNVTDIMKTANFLPILISIMNSSIGSNSPSTTSFAESAACVIIRFTNSSDKKLQLYSAEHGVFPLLVKLLSSGSAITKSKAATSLAQLSQNSLTLRKSRKSRWLCVLPSMDAYCGVHGGNCFVNSTFCLVKASAVRPLIRILEDKEREAVEAALIALSTLLQDEIWEGGVNSIAKFSGVQAIIKCLELEDAKVQEKAIWMLERIFRVEEYRVKYGESAQVVLINIAQKSDSRLKSIAAKVLAELELLLAQSSYF* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0659 830 SUPERFAMILY ARM repeat 340 785 IPR016024 -
Lan5g0659 830 Gene3D - 695 825 IPR011989 -
Lan5g0659 830 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 376 418 IPR000225 GO:0005515
Lan5g0659 830 Gene3D - 551 678 IPR011989 -
Lan5g0659 830 Coils Coil 70 90 - -
Lan5g0659 830 SMART arm_5 491 531 IPR000225 GO:0005515
Lan5g0659 830 SMART arm_5 406 449 IPR000225 GO:0005515
Lan5g0659 830 SMART arm_5 324 364 IPR000225 GO:0005515
Lan5g0659 830 SMART arm_5 365 405 IPR000225 GO:0005515
Lan5g0659 830 SMART arm_5 698 738 IPR000225 GO:0005515
Lan5g0659 830 SMART arm_5 626 666 IPR000225 GO:0005515
Lan5g0659 830 SMART arm_5 742 782 IPR000225 GO:0005515
Lan5g0659 830 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 830 - -
Lan5g0659 830 SUPERFAMILY ARM repeat 171 426 IPR016024 -
Lan5g0659 830 Pfam Armadillo/beta-catenin-like repeat 366 404 IPR000225 GO:0005515
Lan5g0659 830 Gene3D - 65 360 IPR011989 -
Lan5g0659 830 Gene3D - 361 550 IPR011989 -
Lan5g0659 830 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN-LIKE 1 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0659 Lan-Chr5 15394360 15398752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0659 160 830 U-box Gene Family AT1G76390 27.591 6.16e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0659 K08332 - gmx:100791453 1211.05