Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan5g0658 | ATGACAGTTGTTGAAATAATTACTAATTTGCAACCAAATGCAAATATTCTATTTATAGATGTGGTCCTTGTTGAGAAGAAAAACAAGAAGAAGAATAAGAAGAAAACGACCAAAGAGTCTGAAGAGGCAACTACTCCAAATCAAATTGCTAACACTGTTGAAAATAAGGATTTATCCATCTCAGAGAAATCAGGGAAAAAACAGACTGAAGACAAGCCATCTCAAGTTAGAAGCTTTGCAAATGGGTTGGTTATTGAGGAGTTATCTACGGGTAAACCAGATGGCAAAAGTGCTACTCCTGGAAAGAAGGTCAGTGTTAAATATATTGGCAAACTAAAAAAGAATGGAAAAATATTTGACTCAAATGTGGGGAGAGCAACATTTAAATTTCGCCTTGGTTTAGGACAAGTCATCAAGGGGTGGGAAGTTGGAGTCAATGGGATGAGGATTGGTGACAAAAGAAGAATCACAGTTCCACCATCTATGGGGTATGGAGACAAACGTGCTGGGAGTATACCACCGAATTCTTGGCTTGTATTTGATGTGGAATTGGTTAATGTTGGTGGCTAA | 570 | 0.3789 | MTVVEIITNLQPNANILFIDVVLVEKKNKKKNKKKTTKESEEATTPNQIANTVENKDLSISEKSGKKQTEDKPSQVRSFANGLVIEELSTGKPDGKSATPGKKVSVKYIGKLKKNGKIFDSNVGRATFKFRLGLGQVIKGWEVGVNGMRIGDKRRITVPPSMGYGDKRAGSIPPNSWLVFDVELVNVGG* | 190 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan5g0658 | 189 | MobiDBLite | consensus disorder prediction | 42 | 58 | - | - | |
| Lan5g0658 | 189 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 96 | 185 | IPR001179 | GO:0003755 | |
| Lan5g0658 | 189 | Gene3D | - | 47 | 188 | IPR046357 | GO:0003755 | |
| Lan5g0658 | 189 | MobiDBLite | consensus disorder prediction | 59 | 73 | - | - | |
| Lan5g0658 | 189 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 25 | 187 | - | - | |
| Lan5g0658 | 189 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 25 | 187 | - | - | |
| Lan5g0658 | 189 | MobiDBLite | consensus disorder prediction | 29 | 76 | - | - | |
| Lan5g0658 | 189 | SUPERFAMILY | FKBP-like | 10 | 187 | - | - | |
| Lan5g0658 | 189 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 101 | 188 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan5g0658 | Lan-Chr5 | 15390818 | 15393139 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan5g0658 | 101 | 186 | Calmodulin-binding Proteins | AT5G48570 | 34.409 | 1.03e-08 | 52.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan5g0658 | K14826 | - | gmx:100792856 | 244.588 |