Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0643 ATGACCATGGAACCACACCAAACATCAGATCATATTCTAGACTGGCTTGAAAGTTCTGTCTCTTACTTTCCATCATTCTTGGATGAACCATACAATTCCGGCGAAGTCCAAGAGTATCAATTGTGGGATCAGGAGGACCAACACACAGTAAGCCAGTACCATATTGATGCCAACATAGACTCTCTCAATGCCATCAACCCCAACAGCAATACGAATACCATTGCAGCTGCTACAAGTACCACCACTAGCACAACACCCCCTGAGCCTTATGACTCAAGCAACATACCACTTTTTGATATGCCCAAGAAAAAAAATGCCACTGATGTCTTAAGTCTCAAACCCACACAAAATCACAAATACAAGAAGATCAAGAGTCGTCCGATGAATAAACGGGAGAATAGAGACACAGTTATTAAAGAGACAACAACTGTGATTAGAAAATCTAGTGGGAACAAGAAAGGTTCAGCTAAAGCAAATGCGAATAACTTAAACAATAGAAACAACAAGGAAGGTAGGTGGGCAGAACAGTTGCTCAATCCTTGTGCTGTTGCTATATCCGGAGGAAACCTGAACCGTGTGCAACATCTCTTGTATGTTCTCAATGAGCTAGCTTCACCTACAGGTGATGCAAACCACAGGCTTGCAGCACATGGTCTCAAAGCACTGACACACCATTTATCATCATCTTCTTTATCCTCATCATCATCTGCTACATCTTCAGGGGTTATAACATTTGCGTCTGCTGACCCGCGTTTCTTTCAAAAGTCACTACTCAAGTTCTATGAGGTTAGCCCCTGGTTTTCCTTTCCTAATAACATAGCAAATGCTTCCATCCTTCAAGTTCTCGCCGAAGCACCAAATAGTACGCGTACCCTTCATATTCTTGACATTGGGGTTTCTCATGGTATGCAATGGCCGATTTTTCTAGAGGCCTTGAGTCGCAAACCCGGTGGACCTCCTCCACTGGTCCGCCTCACCGTTGTGACTGCTGAAAATGAACAAAACAAGGAGACTCCATTTTCAGTAGGTCCCCCAGGCGATAACTTCTCTTCTAGACTCCTTGGTTTTGCCAAGTCCATGAACATCAATTTGCAGATAAAGAAGCTTGATAATCATCCATTGCAGAGCTTAAATGCTCAAATTATTGACACCTCCCCAGATGAAACTTTTATTGTCTGTGCACAGTTTAGGCTGCACCATTTGAATCATAATGCTTCTAATGAAAGGAATGAGTTTCTGAAGGTGTTGAGAAACATGGAGCCACAAGGGGTGATATTAAGTGAGAACAACATGGAATGTTGCTGCAATAGTTGTGGGAATTTCGCTGATGGTTTCAGTAGAAGAGTGGAGTACTTGTGGAGGTTTTTGGATTCAACTAGCTCTGCATTCAAGGGTCGAGAATGTGATGAAAGAAGAGTGATGGAAGGCGAGGCAGCGAAAATATTGACAAACCAGCGTGAGATGAATGAAGGGAAAGAAAAATGGTTTGGAAAAATGAAAGAAGCAGGGTTCATATGGCAAGTGTTTGGAGAGGATGCCATAGATGGAGGACAAGCTTTGTTGAGGAAGTATGATAGTAATTGGGAGATGAAAGTTGAAGAAAACAACACGAGTGTGGGACTATGGTGGAAGGGGCAACCTGTTTCTTTCTGTTCTTTGTGGAAGTTGGATGGAAACTACCAGAGTAGATTCCGTGATCAGCTTTAA 1707 0.4271 MTMEPHQTSDHILDWLESSVSYFPSFLDEPYNSGEVQEYQLWDQEDQHTVSQYHIDANIDSLNAINPNSNTNTIAAATSTTTSTTPPEPYDSSNIPLFDMPKKKNATDVLSLKPTQNHKYKKIKSRPMNKRENRDTVIKETTTVIRKSSGNKKGSAKANANNLNNRNNKEGRWAEQLLNPCAVAISGGNLNRVQHLLYVLNELASPTGDANHRLAAHGLKALTHHLSSSSLSSSSSATSSGVITFASADPRFFQKSLLKFYEVSPWFSFPNNIANASILQVLAEAPNSTRTLHILDIGVSHGMQWPIFLEALSRKPGGPPPLVRLTVVTAENEQNKETPFSVGPPGDNFSSRLLGFAKSMNINLQIKKLDNHPLQSLNAQIIDTSPDETFIVCAQFRLHHLNHNASNERNEFLKVLRNMEPQGVILSENNMECCCNSCGNFADGFSRRVEYLWRFLDSTSSAFKGRECDERRVMEGEAAKILTNQREMNEGKEKWFGKMKEAGFIWQVFGEDAIDGGQALLRKYDSNWEMKVEENNTSVGLWWKGQPVSFCSLWKLDGNYQSRFRDQL* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0643 568 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 555 IPR005202 -
Lan5g0643 568 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 555 IPR030015 -
Lan5g0643 568 ProSiteProfiles GRAS family profile. 165 555 IPR005202 -
Lan5g0643 568 MobiDBLite consensus disorder prediction 145 167 - -
Lan5g0643 568 Pfam GRAS domain family 175 555 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0643 Lan-Chr5 14273224 14275256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0643 2 555 GRAS Transcription Factor Family AT3G13840 48.571 2.25e-172 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan5g0643 GRAS 4.4e-74 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0643 - - gmx:100810818 778.859