Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0638 ATGGTGTCATTCCAAGATGAAGTAGGCCCCACCGTGATTGCCATCGACGGAAGCCGGAATAGCCAACACGCTGTCAAATGGGCCGTCGATCACCTTCTCATGAAAGACACCTCTTGCGTCCTCATTCATGTTCGCACTAAGGCCTTGCATCCCCATGATGTCGATCATGTCCCTAAAGATGGCCGACCTCCAACTCTAGAAGAATTGCACCAATTTTTTCTTCCCTTTAGGGGATTTTGTGCTAGAAAAGGGATTGAAGCAAAGGAGTTGGTTCTGCATGACATTGATGTTCCAAGTGCTCTTACTGATTATGTTATCAAAAACTCTATTTCTAATATTGTTGTTGGTGATTCCCATTGGAATGCTCTTATAAGGAGATTTAGAAATGCCGATGTGCCAACCAGCTTAGCAAAGTCTTTGCCAAAGTCTTGCATATTATATGTTATATCAAAAGGAAAAATGCAAAATATTCGTCCTACAGGTCAACCTCAAAATATTGATGTTACAACAACTAAATCTATAAGAGAATTAGTCACTATCTTGCAAAATTCTCCGTTGGTTCAAACAAATAATGGTACTCCTGATGCACCTGATTCTGAAGATGTAAACAGAAAAGACAATGGTTGGGTATCTTTACATGAACCTAAAGGTGCTATACTGCGTAAGTCCAATGAAGATCTTTATTCACCAACATTATCAGTTGAAAGCTCCACGTCACAATCTTCATCAAATGAAAGTACTCCCAATAACAGTGATAGTTCAGGGAAACTTGGTTCTCAGTTGATTGATAAGTCACAGTCTCCTTCAAAACCCCCAGTAAGTACTATAAGCTTGGAGAAATCAATAAGGAAATTAAAACTAGAACTGAAGAAAACAATGGAGCAGTATAACTTGGTTTCCAGAGAAGCTGTTTTAGCAAGAGAAAGGGCAATGGAGCTTGAAAAGTATATGCAAGAAAAAGAACGCGATGTAGAAAAAGCTAGGCTTGCTGAAGAGGCTGCATTGGCTTTGGCAGAGGTAGAGAGGCAGAAAACCAAGGCGGCTAATGAGTCAGAAGAAATGTCAAAACGCCTGGCAGAAATGGAAAACGAAAAGAGAAATCAAGCCGAATTAAGAGCAGTGCAGGAGAAAGAAGAGCGAAAAGCATTAAATGCAATAACATATAATAAAATTTCATATAGAAGATATGATATTAAAGAAATTGAAGTTGCAACTCACTACTTTGACAGTGCTCTACAAATTGGTGAAGGTGGGTATGGACCAGTTTTTAAAGGAGTGCTTGATCACACTGTTGTTGCCATTAAGGCCCTGAGACCAGACATTACATCCCAAGGGGAAAAGCAATTTCAACAAGAGGTTGATGTATTGAGCAGCATACGACATCCAAACATGGTTCTCCTTCTAGGTGCATGCCCAGAGTTTGGATGCCTTGTGTATGAGTACATGGAAAATGGAAGCTTAGATGATCGCCTTTTCCAGAAAGACAACACCCCACCAATTCCATGGAAAATTCGATTCAGAATTGCATCCGAAATCGCCACTGGGCTTCTTTTCCTTCACCAGACAAAGCCTGAGCCACTGGTGCATCGTGACCTCAAACCAGGAAACATTCTCTTAGACAGGAACTATAAGAGCAAGATCAGTGATGTCGGCTTGGCTCGTCTCGTTCCCCCTTCTGTAGCAAACAAAAGCACTGAGTATCTCATGACAACTGCAGCCGGAACATTTTGCTACATTGACCCAGAGTATCAACAGACAGGGTTGTTGGGTGTAAAATCAGACATATACTCACTTGGTGTTATGCTGCTACAAATTCTTACCGGAAAACCTCCTATGGGTTTATCCCATTTTGTTGAAAATGCTATCAAGAACAATGAAGTCTCAGAAATGCTTGATCCAAGTGTGACAGATTGGCCTGTTGAGGAAGCTCTGGCATGTGCTAAGTTGGCCTTAAAGTGTTGCGAGTTAAGAAAAAGGGACAGACCAGATCTTGGTACTGTAATTTTACCGGAAATGAATCGACTCAGAGATCTTGGAGGAGTCATTGATACTGATGGATAA 2061 0.4105 MVSFQDEVGPTVIAIDGSRNSQHAVKWAVDHLLMKDTSCVLIHVRTKALHPHDVDHVPKDGRPPTLEELHQFFLPFRGFCARKGIEAKELVLHDIDVPSALTDYVIKNSISNIVVGDSHWNALIRRFRNADVPTSLAKSLPKSCILYVISKGKMQNIRPTGQPQNIDVTTTKSIRELVTILQNSPLVQTNNGTPDAPDSEDVNRKDNGWVSLHEPKGAILRKSNEDLYSPTLSVESSTSQSSSNESTPNNSDSSGKLGSQLIDKSQSPSKPPVSTISLEKSIRKLKLELKKTMEQYNLVSREAVLARERAMELEKYMQEKERDVEKARLAEEAALALAEVERQKTKAANESEEMSKRLAEMENEKRNQAELRAVQEKEERKALNAITYNKISYRRYDIKEIEVATHYFDSALQIGEGGYGPVFKGVLDHTVVAIKALRPDITSQGEKQFQQEVDVLSSIRHPNMVLLLGACPEFGCLVYEYMENGSLDDRLFQKDNTPPIPWKIRFRIASEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYKSKISDVGLARLVPPSVANKSTEYLMTTAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQILTGKPPMGLSHFVENAIKNNEVSEMLDPSVTDWPVEEALACAKLALKCCELRKRDRPDLGTVILPEMNRLRDLGGVIDTDG* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0638 686 CDD STK_N 10 152 - -
Lan5g0638 686 Pfam Protein kinase domain 413 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0638 686 Gene3D HUPs 11 147 IPR014729 -
Lan5g0638 686 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 136 - -
Lan5g0638 686 SMART serkin_6 408 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0638 686 MobiDBLite consensus disorder prediction 230 275 - -
Lan5g0638 686 Pfam Universal stress protein family 12 145 IPR006016 -
Lan5g0638 686 CDD STKc_IRAK 414 668 - -
Lan5g0638 686 Gene3D Phosphorylase Kinase; domain 1 386 481 - -
Lan5g0638 686 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 11 679 - -
Lan5g0638 686 SUPERFAMILY Protein kinase-like (PK-like) 387 667 IPR011009 -
Lan5g0638 686 Coils Coil 275 386 - -
Lan5g0638 686 ProSiteProfiles Protein kinase domain profile. 408 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0638 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Lan5g0638 686 Gene3D Transferase(Phosphotransferase) domain 1 482 678 - -
Lan5g0638 686 PANTHER OS02G0152300 PROTEIN 11 679 - -
Lan5g0638 686 MobiDBLite consensus disorder prediction 185 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0638 Lan-Chr5 13809037 13822577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0638 5 679 Receptor kinase-like Gene Family AT1G17540 49.353 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan5g0638 Pkinase 3.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0638 - - lang:109347877 1300.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0638 5 13809037 13822577 Lan3g0238 3 1554406 1559047 PCT