Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0615 ATGAGTCGAGAGCAACAGAAGCGAGGGAAGCAAGAGAATGGCTCTGATGGTACTGAGAAGGTTATTGTTGCTGTTAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCTTTGACTCATGTTGTTCAACCTGGTGATTGCATTACACTGCTAGTTGTTCTGCCATCACAAAGTTCGGGCAGAGGATTATGGGGTTTTCCAAGATTTGGTAGTGACTGTGCCAATAAGAAGTGTCCTACAGGAACATTTTTAGAGCAGAAGAGTGATATAACCGATTGTTGCTCACAGATGATACTTCAGCTCCATGATGTCTATGATCCGAATAAGGTTAATGTTCGGATTAAAATTGTTTCCGGATCACCTTGTGGAGCAGTGGCTGCAGAAGCCAAGAAAGCTCAAGCCAGTTGGGTTGTATTAGACAAACAGCTCAAACACGAGGAAAAGCGATGTATGGAAGAGCTGCAGTGTAACATTGTGGTAATGAAACGTTCCCAACCGAAAGTACTCCGGTTGAATTTGATCGGACCGCAGAAGAAGGATCATGAAGAAGTAGGTCCTTTGCCTTCCGAGCAAGATGAGATGCCTGAAAAGCTAACCAAAAAGAAGAGTGATTCTTTAAATTCTATTAAGGGACCAGTTGTTACTCCAACTAGCAGCCCAGAGCTAGGGACACCTTTCACTGCAACTGAAGCTTGTACTTCATCGGTTTCAAGTTCTGATCCAGGAACTTCACCGTTCTTTATCTCGGATATGAATGGTGAGTTGAAGAGAGAGGAAACAATCAAGGAGAATAAAGAACCTGATGATACTAATTCAGATACAGAAAGTGAAAGTCGGTCTACATCTTCGGCAAGCATGAGATTCCAGCCATGGATCACAGATTTGCTTTTACATCAACGAACATCTCAATGTAATGGAGAAAGATTAGAGATATCATCTCATGATATGTCTCATCATTCATCTACAACCAGAGCATTGCTAGAAAAGTTTTCAAGGCTTGATAGAGGAGCTGGAATTGAAATGTCAAATTATAGAACTGACTCGGATTTCAGTGGAAATCTAAGAGAAGCAATGGCATTATCTAGAAATGCTCCACCCGGTCCACCTCCGTTATGCTCAATATGTCAACACAAGGCACCGATTTTTGGGAAACCTCCGAGGTGGTTCAGCTATGCTGAGTTAGAACTTGCTACTGGTGGATTTTCACAGGCTAACTTCTTGGCAGAAGGAGGATTTGGATCCGTCCACCGAGGGGTTCTGCCAGAGGGACAAGTCATTGCTGTCAAGCAACATAAGTTGGCTAGCTCTCAGGGTGATGTCGAGTTTTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAACACCGAAATGTTGTTATGCTAATTGGGTTCTGTATAGAGGATAAAAGAAGACTACTGGTTTATGAGTACATATGCAATGGATCGTTGGATTCACATTTATATGGGCGACAACGGGAACCATTAGAATGGTCTGCACGGCAAAAAGTTGCTGTTGGAGCTGCTCGTGGGTTACGTTATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGTGACATGCGGCCAAACAACATTCTCATAACTCATGATTTTGAACCACTGGTTGGTGATTTTGGATTGGCAAGGTGGCAGCCTGATGGAGACACCGGTGTCGAAACTAGAGTAATTGGAACTTTTGGGTATTTGGCTCCTGAATATGCGCAAAGTGGCCAAATCACTGAAAAAGCTGATGTTTATTCCTTTGGGGTGGTACTAGTGGAGCTTGTTACCGGGAGAAAAGCTGTGGATCTTAGTCGGCCCAAGGGACAGCAATGTCTTACTGAGTGGGCGCGGCCGTTGTTAGAAAAATATGCCATTGAGGAGCTGATTGATCCCAGACTGAGAAACCACTATTCAGAAAATGAAGCCTACTGTATGCTACATGCTGCATCGTTGTGCATACGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTCCGAATACTAGAGGGTGACATGGTCATGGACATGAGTTACATTTCAACTCCGGGTTATGACGCGGGTAACCGGAGTGGTCGAATATGGTCAGAGCCATTGCAGAGACAGCACCACCATAGTGGTCCCCTGGTAGAAGAGTCACTGGAATCATTCAGTGGGAAACTATCCCTTGAATACAGGCCTACCTATTGGGATAGGGACAAGGGTAGAAGGACATCATGTGAAGATGACATTTAA 2247 0.4441 MSREQQKRGKQENGSDGTEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVLPSQSSGRGLWGFPRFGSDCANKKCPTGTFLEQKSDITDCCSQMILQLHDVYDPNKVNVRIKIVSGSPCGAVAAEAKKAQASWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGPQKKDHEEVGPLPSEQDEMPEKLTKKKSDSLNSIKGPVVTPTSSPELGTPFTATEACTSSVSSSDPGTSPFFISDMNGELKREETIKENKEPDDTNSDTESESRSTSSASMRFQPWITDLLLHQRTSQCNGERLEISSHDMSHHSSTTRALLEKFSRLDRGAGIEMSNYRTDSDFSGNLREAMALSRNAPPGPPPLCSICQHKAPIFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWSARQKVAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLSRPKGQQCLTEWARPLLEKYAIEELIDPRLRNHYSENEAYCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMDMSYISTPGYDAGNRSGRIWSEPLQRQHHHSGPLVEESLESFSGKLSLEYRPTYWDRDKGRRTSCEDDI* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0615 748 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 708 - -
Lan5g0615 748 MobiDBLite consensus disorder prediction 178 206 - -
Lan5g0615 748 MobiDBLite consensus disorder prediction 254 277 - -
Lan5g0615 748 PANTHER OS01G0253100 PROTEIN 16 708 IPR045271 GO:0004714|GO:0006468
Lan5g0615 748 MobiDBLite consensus disorder prediction 207 248 - -
Lan5g0615 748 Pfam Protein tyrosine and serine/threonine kinase 407 672 IPR001245 GO:0004672|GO:0006468
Lan5g0615 748 MobiDBLite consensus disorder prediction 178 287 - -
Lan5g0615 748 ProSiteProfiles Protein kinase domain profile. 403 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0615 748 SUPERFAMILY Protein kinase-like (PK-like) 387 681 IPR011009 -
Lan5g0615 748 Gene3D Transferase(Phosphotransferase) domain 1 479 684 - -
Lan5g0615 748 CDD STKc_IRAK 409 675 - -
Lan5g0615 748 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Lan5g0615 748 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0615 Lan-Chr5 12557335 12562711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0615 383 677 Trihelix Transcription Factor Family AT1G70460 53.311 3.18e-102 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lan5g0615 PK_Tyr_Ser-Thr 5.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0615 - - gmx:100783226 1306.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0615 5 12557335 12562711 Lan9g0641 9 9436100 9441631 LSH
Lan6g2131 6 31801181 31807121 Lan5g0615 5 12557335 12562711 PCT
Lan5g0615 5 12557335 12562711 Lan6g2131 6 31801181 31807121 PCT