Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0607 ATGGCTTCTTCTTCTTTCTCTGCTGCAACATCTATTAAAAAATATGATGTGTTTATCAGCTTTAGAGGTGAAGACACTCGTGACAACTTCACAAGCCATCTTCATGCTGCTTTACTCCGACACGAAATCGAAACCTACATAGATTACAAGCTTGAGAAAGAAGATGAAGTTTGGTTATCACTTGTGGAAGCTATCCATGATTCTAGTGTGTTTCTTGTAATCTTCTCAGAGAACTATGCTTCTTCAACGTGGTGCTTGAATGAGCTAGTTGAAATAATGGAATGCAAGAAAAAGGGTGGGTATGTTATTCCAATATTCTACAGAATTGAGCCATCACATATAAGGAAGCAATCAGGGAGTTATGAAAAATCATTTCATAAACATGAGATGGATTTCAAACACAACAATGAGACTATGCAAAAGTGGAAGGACAATCTCATAGAAGCAGCCAATACTTCAGGCTTCCATTCAAATTCTCGTCAATACAGGGATGAATCTGACATGATTGACAACATCGTCAAATTGGTATTGCAAAAACTAAATAGCAAATGTTCCTATGAGCTAAGAGGTTGCTTTATACAAGATGAAAACTATGCAAAGATTATATCTTTGTTAAGCATTGACTCAAGAGATGTTAGAATCATTGGCATTTGGGGCATGGGTGGAATAGGTAAGACAACCATTGCAGAAGCTGTTTTTAGTGAAGTAGCTTCACTATTTGAAGGTGTTTGCTTCTTTGAAAATTTGAGGGAACAATCAAAAACATATGGTCTGAATCACATTTATAGTAGAATTCTTTCTAAGCTACTAGGGGAAGATCTTCACATTGACACTCCCAAACTAATACCCTCTTTTGTTGTGAGTAGACTCAGCCGCAAGAAAGTTTTCATTGTACTCGACGACGTGAATTCGATAGATCTTATAGAGAATTGTGTTGGATTAGGGAATGATTGGCTTGGAGCTGGAAGTAGAGTAATTGTTACAACCAGAGATAAGCAAGTTCTTATAAATGGAGGAGTTGACAAGATCCATGAAGTCAAGGAAATGAACATTCAAAACTCCCTTCAACTTTTCAGCTTTTATGCCTTCAAAAAAGCTAATCCTAAAAAGGGATATGAGGAACTATCAAAAAGAGCAATTGTTTATGCCAATGGTATCCCCTTAGCTTTGAAAATCTTGGGATCACTTCTTCATTCCAAAGGCAAAAATGAATGGAAAAGTGCACTAATGAAATTGAAGAAGTTTCTCAATCCTAAAATTCAGAGTTTGAGTTACAACGAACTAGATGATACAGATAAAAAAATATTTCTTGACATTGCGTGTTTTTTTAAAAGCCATGATATATATTGGTTCAAATAA 1359 0.3569 MASSSFSAATSIKKYDVFISFRGEDTRDNFTSHLHAALLRHEIETYIDYKLEKEDEVWLSLVEAIHDSSVFLVIFSENYASSTWCLNELVEIMECKKKGGYVIPIFYRIEPSHIRKQSGSYEKSFHKHEMDFKHNNETMQKWKDNLIEAANTSGFHSNSRQYRDESDMIDNIVKLVLQKLNSKCSYELRGCFIQDENYAKIISLLSIDSRDVRIIGIWGMGGIGKTTIAEAVFSEVASLFEGVCFFENLREQSKTYGLNHIYSRILSKLLGEDLHIDTPKLIPSFVVSRLSRKKVFIVLDDVNSIDLIENCVGLGNDWLGAGSRVIVTTRDKQVLINGGVDKIHEVKEMNIQNSLQLFSFYAFKKANPKKGYEELSKRAIVYANGIPLALKILGSLLHSKGKNEWKSALMKLKKFLNPKIQSLSYNELDDTDKKIFLDIACFFKSHDIYWFK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0607 452 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 446 - -
Lan5g0607 452 ProSiteProfiles TIR domain profile. 13 180 IPR000157 GO:0007165
Lan5g0607 452 Gene3D - 178 340 IPR027417 -
Lan5g0607 452 Gene3D - 349 429 IPR042197 -
Lan5g0607 452 PRINTS Disease resistance protein signature 214 229 - -
Lan5g0607 452 PRINTS Disease resistance protein signature 289 303 - -
Lan5g0607 452 PRINTS Disease resistance protein signature 383 397 - -
Lan5g0607 452 SMART till_3 14 152 IPR000157 GO:0007165
Lan5g0607 452 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 155 IPR035897 -
Lan5g0607 452 Gene3D - 12 177 IPR035897 -
Lan5g0607 452 Pfam TIR domain 14 184 IPR000157 GO:0007165
Lan5g0607 452 Pfam NB-ARC domain 197 428 IPR002182 GO:0043531
Lan5g0607 452 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 446 IPR044974 GO:0006952
Lan5g0607 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 439 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0607 Lan-Chr5 12398912 12408960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0607 10 447 WRKY Transcription Factor Family AT4G12020 32.432 1.54e-54 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0607 - - gmx:100783388 563.918