Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0604 ATGGCGACAGTACCAGGCCAACTCGTGTGGGAGATTGTTAAGAGGAACAATTCCTTTTTGGTTAAACAATTTGGAAGAGGCTCTCAGAGCATTGAATTCAGCAAAGAACCCAACAATCTCTACAACCTCAATTCCTACAAATACTCAGGATTGGCCAACAAGAAAACTGTTACCATTCAAGCTAATGGTAAAGATCAGGGTGTGTTGTTGGCTACAACTAAGACTAAGAAGCAAAACAAGCCTTCTGCTTTGGTTCACAAATCTGTTTTGAAAAAGGATTTCAGGAGGATTGCTAAGGCTGTGAAAAATCAGGTGGCCGATAACCACTATAGACCTGATCTCAAGAAGGCTGCCCTTGCAAGGTTGAGTGTTGTTCACAAAAGCCTCAAAGTTGCCAAGTCTGGTGCTAAGAAGAGGAACAGGCAGGGTGCAAGGAAGTGA 441 0.4308 MATVPGQLVWEIVKRNNSFLVKQFGRGSQSIEFSKEPNNLYNLNSYKYSGLANKKTVTIQANGKDQGVLLATTKTKKQNKPSALVHKSVLKKDFRRIAKAVKNQVADNHYRPDLKKAALARLSVVHKSLKVAKSGAKKRNRQGARK* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0604 146 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 143 - -
Lan5g0604 146 PANTHER 60S RIBOSOMAL PROTEIN L28 1 143 IPR002672 GO:0003735|GO:0005840|GO:0006412
Lan5g0604 146 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Lan5g0604 146 Gene3D - 6 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0604 Lan-Chr5 12281656 12284269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0604 1 142 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 75.352 4.08e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0604 K02903 - gmx:100499921 244.202