Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0598 ATGAGAAACTCTGAAGCAACTCATGTAGCTATGGAAATAGAGGCAAGTAAACCAACAGGGAATGTAACAACACTTCCAGGGTTGAGTCCTTTGAGTGAAACAATTTGGAGAGAAAAGACAGACACAGAAATAATTGGAGATGTTTCAGCAAGGCTAACATGGAAGGATCTAACTGTGATGGTTACCCTTAGCAATGGAGAAACTCAGAATGTTTTGGAAGGTTTAACTGGTTATGCTGAACCTGGTACCTTCACTGCTCTCATGGGACCCTCAGGTTCTGGAAAATCTACTCTTCTTGATGCTCTTTCTAGTCGCCTAGCTGCAAATGCTTTTCTCTCAGGCACCATTCTTCTCAATGGTCGCAAAGCCAAACTCTCTTTTGGCACTGCAGCTTATGTGACACAAGATGACAACCTAATTGGTACCTTAACGGTACGAGAAACAATTTCATACTCAGCAAGGCTTCGTTTGCCTGATAAGATGCCATGGTCAGATAAAAGAGCTTTAGTTGAGAGTACTATAGTTGCAATGGGTCTTCAAGATTGTGCTGATACAGTGATTGGAAACTGGCACTTGCGTGGGATCAGTGGTGGGGAGAAGAGAAGGGTTAGCATTGCTTTGGAAATCTTGATGAGGCCTAGATTGCTTTTCCTTGATGAACCAACTAGTGGCCTAGACAGTGCTTCTGCTTTCTTTGTAACACAAACACTACGTGCTTTAGCAAGAGATGGGAGAACTGTGATAGCTTCTATTCATCAACCTAGCAGTGAAGTGTTTGAACTATTTGACCAATTGTACTTACTTTCTGGTGGCAAAACTGTTTATTTTGGCCAAGCTTCTGAAGCATATGAGTTCTTTGCACAAGCTGGCTTTCCATGTCCTGCTTTGAGGAACCCATCAGATCATTTCCTTAGATGTGTAAATTCTGACTTTGACAAAGTCAAGAGCACTCTTAAAGGGTCCATGAAACTAAGGTTTGAGGGAAGTGATGATCCCCTAGACAAGATCACTACTGCTGAAGCTATAAGAACTCTTCTTGACTTCTACCGCACTTCTCAGCAATCTTATGCTGCAAGACAAAAAGTTGATGAGATATCCAAAGTTAAGGGAACTGTTCTTGATGCAGGAGGAAGTCAAGCTAGTTTCTTCATGCAGTCTTACATCTTAACCAAACGCTCATTCATCAACATGTCAAGAGATTTTGGTTACTATTGGCTTAGGCTTGTTATCTACATTGTGGTTACTCTTTGCATTGGTACAATTTATTTGAATGTGGGAACAGGCTACAACTCAATTCTGGCAAGGGGTTCATGTGCTTCTTTTGTATTTGGTTTTGTCACCTTCATGTCAATTGGTGGATTTCCTTCATTTGTTGAAGATATGAAGGTTTTTCAAAGGGAGAGGCTTAATGGACACTATGGTGTCCTTGGATTTGTCATCAGCAACACGATATCTGCGACGCCGTTCCTGATATTGATCACGTTTCTCTCCGGAACAATTTGTTACTTCATGGTTCGCCTGCATCCTGGTTTTTGGCATTACCTGTTCTTTGTGCTGTGCCTTTATGCCAGTGTCACAGTGGTCGAAAGCTTAATGATGGCAATTGCTAGTGTTGTTCCTAACTTCCTCATGGGCATCATAATTGGAGCAGGAATTCAGGGTATATTCATGTTGGTCTCTGGGTACTTTAGGCTCCCACATGATATCCCAAAGCCAGTTTGGCGCTACCCAATGTCATATATCAGTTTCCACTTTTGGGCATTACAGGGGCAATACCAAAATGATCTGAAGGGCTTGATATTCGACAACCAGACACCCGACCTTCCAAAGATACCAGGTGAATATATCCTTGAGTATGTGTTCCAGATTGATGTCAATAGATCGAAGTGGATAGACTTAAGTGTTATCTTGAGCATGATCATTATCTATCGCATTATCTTCTTCATCATGATCAAAATCAATGAGGATGTGACCCCTTGGGTTAGAGGGTACTTAGCTAGGAGAAGAATGCAACAGAAGAGTGGAGCTCAGAATACAACTATTGCACCTGATGTTCTCACTCAATCACCATCTCTGAGAACCTACATTTCCAATCAAACAAAAAATGGCACTTCCAGAAGTTAG 2124 0.4167 MRNSEATHVAMEIEASKPTGNVTTLPGLSPLSETIWREKTDTEIIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPWSDKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCVNSDFDKVKSTLKGSMKLRFEGSDDPLDKITTAEAIRTLLDFYRTSQQSYAARQKVDEISKVKGTVLDAGGSQASFFMQSYILTKRSFINMSRDFGYYWLRLVIYIVVTLCIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVLGFVISNTISATPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASVVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLKGLIFDNQTPDLPKIPGEYILEYVFQIDVNRSKWIDLSVILSMIIIYRIIFFIMIKINEDVTPWVRGYLARRRMQQKSGAQNTTIAPDVLTQSPSLRTYISNQTKNGTSRS* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0598 707 CDD ABCG_EPDR 49 277 - -
Lan5g0598 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 289 IPR027417 -
Lan5g0598 707 Gene3D - 46 290 IPR027417 -
Lan5g0598 707 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524
Lan5g0598 707 Pfam ABC transporter 74 223 IPR003439 GO:0005524
Lan5g0598 707 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 698 - -
Lan5g0598 707 SMART AAA_5 81 252 IPR003593 -
Lan5g0598 707 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 295 IPR003439 GO:0005524
Lan5g0598 707 Pfam ABC-2 type transporter 385 591 IPR013525 GO:0016020|GO:0140359
Lan5g0598 707 PANTHER OS04G0528300 PROTEIN 5 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0598 Lan-Chr5 11913755 11919141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0598 82 256 Calmodulin-binding Proteins AT2G36910 33.871 1.63e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0598 K05681 - gmx:100803731 1292.72