Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0569 ATGCCTAAGAAGATTCGAAAGTCCCTTCAAAACTACCTCTCCAAGATAAAAATTCCTAGATCAAAAGTCCACATACCCTCTAAGCAAAGGTTTCTCTCGGTTAGAAAGCATAGAAGGACCTCTTCTTTTGTCAATGATGACATTAGTCCTAAGGCTTCTTCTTTCTCCATGGATGATAAGAAAAATAATGATAAAGATGTTGAAACCACACTAACGGATATTGATCATTTTCTCTTGGAGAATTTCAAGTCTTTGTACATCAAAGATGATGAAGAAAAGGTTCATGATGATGAAGAAGAAGAAGAAGAAGAAAGGCATGAAAATGGTAAATTTCCAAAGCTAGGACCCTTCCTTTTTAAGGCACCACCAAGGGATCGTTATGGCTCTAATAGGTTCAACATGAAACGTGACTTCTCAGGCTCACTTGAGGATGCCACCATAGGTGACCAAACACGATCAAGTACAACTTCGACCATGACCATAAATGATTCACCGTCTTCAAATTCCTCTTACGCAAAGGATCAAGATATGGAACAAATTCGACCCAATAATTGCATAGTGATTTTGGGGTGTTCACCAAATCCTTATGAGGACTTCCATCGATCCATGCAAAACATGGTTGAAGCAAGGCTCAAGAACAATGAAAGTGTGGATTGGGATTTCATGGAACAACTCTTGTTTTTTCACATGAACATGAATGAGAAAAAATATTACAAGTTCATACTTAGTGCTTTTGTGGATTTGGTCACTGTTATGCGGCCACCTTCAGAAACCACACCTGCAATGGTGAATCCAAGGAGTGTTAGAACTATTAGGAGTGGAAAGAAAGTGAAGTAG 837 0.3871 MPKKIRKSLQNYLSKIKIPRSKVHIPSKQRFLSVRKHRRTSSFVNDDISPKASSFSMDDKKNNDKDVETTLTDIDHFLLENFKSLYIKDDEEKVHDDEEEEEEERHENGKFPKLGPFLFKAPPRDRYGSNRFNMKRDFSGSLEDATIGDQTRSSTTSTMTINDSPSSNSSYAKDQDMEQIRPNNCIVILGCSPNPYEDFHRSMQNMVEARLKNNESVDWDFMEQLLFFHMNMNEKKYYKFILSAFVDLVTVMRPPSETTPAMVNPRSVRTIRSGKKVK* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0569 278 Coils Coil 87 107 - -
Lan5g0569 278 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 191 250 IPR006458 -
Lan5g0569 278 ProSiteProfiles OVATE domain profile. 188 251 IPR006458 -
Lan5g0569 278 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 261 - -
Lan5g0569 278 Pfam Transcriptional repressor, ovate 192 250 IPR006458 -
Lan5g0569 278 MobiDBLite consensus disorder prediction 146 172 - -
Lan5g0569 278 MobiDBLite consensus disorder prediction 90 115 - -
Lan5g0569 278 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 261 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0569 Lan-Chr5 11364002 11365566 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan5g0569 Ovate 3.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0569 - - mtr:MTR_4g012060 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0242 10 1533596 1534651 Lan5g0569 5 11364002 11365566 PCT
Lan3g0182 3 1180188 1181329 Lan5g0569 5 11364002 11365566 PCT
Lan5g0569 5 11364002 11365566 Lan10g0242 10 1533596 1534651 PCT
Lan5g0569 5 11364002 11365566 Lan3g0182 3 1180188 1181329 PCT