Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0549 ATGGTTCACTCCAAGAAATTCAGAGGTGTCAGGCAACGCCATTGGGGATCATGGGTTGCTGAGATTCGCCATCCATTATTGAAAAGGAGGGTGTGGCTTGGGACATTTGAGACAGCAGAAGAAGCAGCTAGAGCATATGATGAAGCAGCAATTTTGATGAGTGGAAGAAATGCAAAAACAAATTTCCCAGTTTCTGATAAACCAAATACAAATAATCACAATTATACTACAACTTCATCATCATCTTCATCTTCTTCTAAATCATTATCTGCAGTTGTAAGTGCAAAGCTTAGAAAATGTTGCAAATCACCATCACCTTCACTCACTTGTCTAAGGCTTGATACTGAGAATTCTCACATTGGTGTGTGGCAAAAAAGAGCAGGGTCTCGTTCTGATTCAAACTGGATCATGATGGTTGAGTTAGAAAGGAAGAATAATGCAATAGGAGTAGTTAATTCTGATGATTCAGAATTGCAAATTCAAGAGCCTGAAATGCAAGAAAAGGTAATAAAACCAGAAGAAAATAATAATAGTAATAGTAATAATAATAATATTAATAATAATGATGATGATAATAATGGAGGGTTAGATGAAGAGGAAAAAATTGCATTGCAAATGATAGAGGAACTTCTTAATAGGAATTAA 645 0.3519 MVHSKKFRGVRQRHWGSWVAEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVSDKPNTNNHNYTTTSSSSSSSSKSLSAVVSAKLRKCCKSPSPSLTCLRLDTENSHIGVWQKRAGSRSDSNWIMMVELERKNNAIGVVNSDDSELQIQEPEMQEKVIKPEENNNSNSNNNNINNNDDDNNGGLDEEEKIALQMIEELLNRN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0549 214 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WIN1 1 214 - -
Lan5g0549 214 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Lan5g0549 214 MobiDBLite consensus disorder prediction 61 86 - -
Lan5g0549 214 MobiDBLite consensus disorder prediction 166 196 - -
Lan5g0549 214 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Lan5g0549 214 MobiDBLite consensus disorder prediction 172 191 - -
Lan5g0549 214 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Lan5g0549 214 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Lan5g0549 214 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Lan5g0549 214 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Lan5g0549 214 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Lan5g0549 214 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 214 - -
Lan5g0549 214 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0549 Lan-Chr5 11031663 11033156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0549 1 214 AP2-EREBP Transcription Factor Family AT1G15360 58.222 2.29e-79 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan5g0549 AP2 1.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0549 - - lang:109346994 270.011