Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0537 ATGGGTTCTGAACGTACAAGGTGCATAGAGAGAGAGAAAGAGAAGGTTAAGGCTTTTTGGTTGTGTTGTGCAAAATTTGATGGCAAAAAGCGAGGGAAAACGCAAACTACATGGCGGGTGTTTTCTTTGAAGGAATTACACTCTGCTACGAATAAATTCAACTATGATAACAAGCTTGGAGAAGGGGGTTTCGGCAGTGTTTACTGGGGACAACTTTGGGACGGATCGCAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACGAAGTGGATATGGAATTTGCTGTCGAAGTTGAAATATTGGCAAGAGCGCAACACAAGAATCTTCTAAGTCTCCGTGGCTATTGTGCTGAAGGACAGGAACGATTAATTGTATATGACTATATGCCAAATTTGAGCCTGCAATCTCATCTTCATGGACAGCACTCAGCAGCATCACTTCTCGGCTGGAATCGGCGGATGAAAATTGCAATCGGGTCTGCTGAGGGAATTCTATATCTTCACCACCAAGCAACACCACATATCATCCACGAAGATATTAGAGGAAGCAATGTATTGCTCGATTCAGATTTCAAGGCACGTGTCGCTGATTTTGGTTTCGCTAAGTTAGTCCCTGATGGTGCAACGCATGTGACTACAAAAGTTAAGGGTACGCTTGGCTACCTTGCTCCGGAATATGCTATGTTAGGTAAAGCAAATACGAGTTGTGATGTCTTCAGTTTTGGAATACTCCTTCTAGAACTCGCCAGTGGCAGAAAACCGGTGGAAAAGGTTAGTTCCACGGAGACGCGATCGATATTTGATTGGGCACTGCTGTTGGTTTGTGAGAAGAAATTTTGCGAACTTGTTGATCCAAGACTAAATGGTGAGTATGTGAAGGAAGAGGTTAAAAGAGTTGTTCTTGTTGCAATGATATGTGCTCAAAGTGAACCTGAGAAAAGACCTACCATGCTTGATGTAGTAGAGCTACTGAAGGGAAAATCTAAAGAGAAATTTTCTCAGATAGAGAATAGTGAAATGTTTAGAAGCACTCCTACTGGAATTAAAACATGA 1053 0.4207 MGSERTRCIEREKEKVKAFWLCCAKFDGKKRGKTQTTWRVFSLKELHSATNKFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNEVDMEFAVEVEILARAQHKNLLSLRGYCAEGQERLIVYDYMPNLSLQSHLHGQHSAASLLGWNRRMKIAIGSAEGILYLHHQATPHIIHEDIRGSNVLLDSDFKARVADFGFAKLVPDGATHVTTKVKGTLGYLAPEYAMLGKANTSCDVFSFGILLLELASGRKPVEKVSSTETRSIFDWALLLVCEKKFCELVDPRLNGEYVKEEVKRVVLVAMICAQSEPEKRPTMLDVVELLKGKSKEKFSQIENSEMFRSTPTGIKT* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0537 350 Gene3D Phosphorylase Kinase; domain 1 23 128 - -
Lan5g0537 350 PANTHER BNAA05G14800D PROTEIN 20 344 - -
Lan5g0537 350 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
Lan5g0537 350 Pfam Protein tyrosine and serine/threonine kinase 55 324 IPR001245 GO:0004672|GO:0006468
Lan5g0537 350 ProSiteProfiles Protein kinase domain profile. 53 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0537 350 PIRSF ILK 13 343 - -
Lan5g0537 350 SUPERFAMILY Protein kinase-like (PK-like) 34 324 IPR011009 -
Lan5g0537 350 PANTHER OS01G0750732 PROTEIN 20 344 - -
Lan5g0537 350 Gene3D Transferase(Phosphotransferase) domain 1 129 342 - -
Lan5g0537 350 ProSitePatterns Tyrosine protein kinases specific active-site signature. 175 187 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0537 Lan-Chr5 10856125 10859319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0537 41 324 Trihelix Transcription Factor Family AT1G70460 50.000 3.13e-90 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lan5g0537 PK_Tyr_Ser-Thr 1.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0537 - - csin:114255776 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0537 5 10856125 10859319 Lan2g0624 2 10670341 10677832 LSH
Lan10g0199 10 1279591 1282366 Lan5g0537 5 10856125 10859319 PCT
Lan5g0537 5 10856125 10859319 Lan10g0199 10 1279591 1282366 PCT