Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0530 ATGGGAAAGAAAGTATGTGTAAGTGGTGGTGGTGGATTTGTAGCATCTTGGCTTATTAAGCTTCTTCTTTCGAAAGGTTACATTGTTCATGCAACTATAAGACAACCTGGTAATGAGAAATATGAGCACTTGCTGAAATTAGAGAGAGCTTCTGAAAATCTTACAATCTTCAAAGCAGATCTCTTAAATCATGAATCTCTCTACTCAGCAATTGTTGGATGCAATGCTGTTTTTCATGTTGCTAGCCCTGTCCCCTCAACAACTGTACCTAATCCTGAGGTAGAAGTCATTGAGCCTGCAGTGAAAGGAACTAAAAATATACTTGAAGCATGTCTTGAAGCTAAAGTAGAACGAGTTGTATTCGTATCTTCTATAGCTGCTATTGTCATGAGCCCAAATTTGCCCAACGATAAAGTGATTGATGAGTCCTGTTGGTCTGATAAAGAGTACTGCAGAAAAACCGAGAACTGGTATTGTTTCTCCAAGACAGAGGCGGAGGAGCAGGCGCTGGACTTCGCGAAAAGAACCGGGCTTTCTGTAGTAAGCATTTGTCCATCCCTTATATTGGGGCCAATTTTACAGTCAACTACTGTCAATGCAAGTAGCTTGGTTCTCCTCAACATTTTAAAAGGTTGCGAGTCATTGGAGAATAAGCATCGCTGGATAGTCGATGTGCGAGATCTAGCTGATGCGATACTTTTGGCTTACGAGAACCTTGCGGCAGAAGGAAGATACTTATGCACTTCACACCCTATCAAGACAAAGGATTTGGTGGAAAAACTGAAGAGCATATATCCTAATAACAACTACCCTACAAACTTTATTGAGGTGGATGATTACACAAGGTTGAGCTCAGAGAAACTGCAAAAGTTGGGTTGGAAATACAGGCCATTAGAGGAAACACTCATTGATTCTGTTGAGAGCTACATAGAGGCTGGTATACTAGAATCAAAATAA 957 0.4075 MGKKVCVSGGGGFVASWLIKLLLSKGYIVHATIRQPGNEKYEHLLKLERASENLTIFKADLLNHESLYSAIVGCNAVFHVASPVPSTTVPNPEVEVIEPAVKGTKNILEACLEAKVERVVFVSSIAAIVMSPNLPNDKVIDESCWSDKEYCRKTENWYCFSKTEAEEQALDFAKRTGLSVVSICPSLILGPILQSTTVNASSLVLLNILKGCESLENKHRWIVDVRDLADAILLAYENLAAEGRYLCTSHPIKTKDLVEKLKSIYPNNNYPTNFIEVDDYTRLSSEKLQKLGWKYRPLEETLIDSVESYIEAGILESK* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0530 318 Gene3D - 1 318 - -
Lan5g0530 318 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 315 - -
Lan5g0530 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 310 IPR036291 -
Lan5g0530 318 Pfam NAD dependent epimerase/dehydratase family 5 241 IPR001509 -
Lan5g0530 318 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 3 315 - -
Lan5g0530 318 CDD FR_SDR_e 5 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0530 Lan-Chr5 10808448 10811916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0530 4 316 Monolignol Biosynthesis Gene Families AT2G33590 61.146 1.25e-145 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0530 - - mtr:MTR_4g009040 501.516