Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0528 ATGGAGGAAGAATCTTGGGAGAATTGGCATCTTCATATGGAAATGAATGATGATATTTTCTTAGAAAAGTGCCACAATGAAGATGATGATGAGTTCCTTAGAGAAATCTTTCTTGAACAACCACCCTTCTCTTTCGAAAATGAAACAAATCATTCCTCCTTTCAAAATAGTCCCACCACCATCGTTGCTGCTGCCACCACCGCCATCGTCGACGGTGGTGTTATTCCACCGATGGTGGCGAGTAATGAACATGGTGGTGAGAAAAGACCTAGTAACACTTTAACTCCAAGGACTTGCATTCTCTCTTTTGGTGACTCAACAATGAAACCTATTACCCATGAACAACATCAAAATAATTATGAACATTTATTAGGAGATGAGGAAAAACCTTCTTCTAATAATCAAAATAAAAGGAAATTTGGAGAACTTAGACCAAGAGAAAGGGTGAACAAGAATCATGTAATGGATCATATAATGGCAGAGAGGAAAAGGAGACAAGATTTGACTGAAAGGTTCATAGCACTTTCAGCCACTATTCCTGGCCTTAACAAGACGGACAAAGCATCTATACTTAGAGCTGCAATCGATTATGTGAAGCAACTTCAAGAAAAAGTGGAAAAGCTAGAAAAAGAAGAGAAAAATGGTTCAGAATCAGTTATATTAATCAAGAAATCTGATATAAGTGGAAATGAAGAAAGCACTTGTAGTGAAACAAGTTGTGAAGATTGTTGTACACTTCCAGAGATTGAAGCAAGAGTTTTGGGTAATGAGGTTCTAATTGAGATTCATTGTGAGAAAGAAAATGGCATTGAGCTCAAATTATTGGACCAACTTGAAAATCTTCACCTTTGTGTCACTGGTACAAGTGTCTTGCCATTTGGGAATTTCACACTTGGCATCACTGTTGTCGCTCAGATGAGTAACACGTACAATATGACGGTGAATGATTTAGTGAAAAACCTCAGAAATGTTATCCGGAATTCGCACATGCCCTGCAATAGTGACCCGTACTAG 1014 0.3817 MEEESWENWHLHMEMNDDIFLEKCHNEDDDEFLREIFLEQPPFSFENETNHSSFQNSPTTIVAAATTAIVDGGVIPPMVASNEHGGEKRPSNTLTPRTCILSFGDSTMKPITHEQHQNNYEHLLGDEEKPSSNNQNKRKFGELRPRERVNKNHVMDHIMAERKRRQDLTERFIALSATIPGLNKTDKASILRAAIDYVKQLQEKVEKLEKEEKNGSESVILIKKSDISGNEESTCSETSCEDCCTLPEIEARVLGNEVLIEIHCEKENGIELKLLDQLENLHLCVTGTSVLPFGNFTLGITVVAQMSNTYNMTVNDLVKNLRNVIRNSHMPCNSDPY* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0528 337 MobiDBLite consensus disorder prediction 124 146 - -
Lan5g0528 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 152 201 IPR011598 GO:0046983
Lan5g0528 337 Pfam Helix-loop-helix DNA-binding domain 157 202 IPR011598 GO:0046983
Lan5g0528 337 Coils Coil 191 218 - -
Lan5g0528 337 SMART finulus 158 207 IPR011598 GO:0046983
Lan5g0528 337 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 5 329 - -
Lan5g0528 337 Gene3D - 150 221 IPR036638 GO:0046983
Lan5g0528 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 211 IPR036638 GO:0046983
Lan5g0528 337 PANTHER BHLH TRANSCRIPTION FACTOR 5 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0528 Lan-Chr5 10788277 10792810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0528 132 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.500 3.56e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan5g0528 HLH 2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0528 - - aprc:113857138 315.464