Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0466 ATGATTCGAAAAGCCTCTATCTCTAAGGAGCTCAATGCCAAACACAACAAGATCTTAGAGGGACTTCTTAAGCTGCCTGAGAATCGGGAATGTGCGGACTGCCGGAACAAGGCACCACGATGGGCGAGTGTAAACCTTGGAATTTTCATTTGCATGCAATGTTCAGGAATTCACCGAAGTCTTGGAGTGCATATATCAAAGGTTCGGTCCACAACATTGGATACATGGTTGCCAGATCAAGTTTCCTTCATGCAATTTATGGGTAATGTGAAGGCAAATCAGCATTGGGAGGCAGAACTGCCGCCAAATTTTGACAGAAATGGATACAGAATCGAGAAGTTTATTCGTAACAAGTATGTGGATAAAAGATGGGCTTCAAAAGGTGGATTTCATGCATCTTCAAAGTCAGTTGACACATCACCAGTTGGTGGAACCATGAGTAATATTCAAAGAAATAGAAGATTGTCTCTGGAGGAAAGCATTCTCGTGAGCCACATGGCACAATATCCACCTCCAGTAACACGATCTCGTGAGGGCTCCTTCGATTTTCAAACGAAGATTTCAGGTTCACCACCATTAAGGAGGCCATCCACATCGCTTGATTTTGATAATTCGTCTCGAAAGGGCAATGGTACTGTTGATCCTTTTGGCTTGCTTAATGATAAAAAAGACTCCTCTGTACCTCCACCAAACTGGATAACATTTGATTGA 711 0.4276 MIRKASISKELNAKHNKILEGLLKLPENRECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQFMGNVKANQHWEAELPPNFDRNGYRIEKFIRNKYVDKRWASKGGFHASSKSVDTSPVGGTMSNIQRNRRLSLEESILVSHMAQYPPPVTRSREGSFDFQTKISGSPPLRRPSTSLDFDNSSRKGNGTVDPFGLLNDKKDSSVPPPNWITFD* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0466 236 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 137 IPR001164 GO:0005096
Lan5g0466 236 Gene3D Arf GTPase activating protein 2 129 IPR038508 -
Lan5g0466 236 Pfam Putative GTPase activating protein for Arf 17 127 IPR001164 GO:0005096
Lan5g0466 236 MobiDBLite consensus disorder prediction 168 236 - -
Lan5g0466 236 CDD ArfGap 19 119 - -
Lan5g0466 236 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Lan5g0466 236 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Lan5g0466 236 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Lan5g0466 236 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 236 IPR044520 GO:0005096
Lan5g0466 236 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 1 236 - -
Lan5g0466 236 SUPERFAMILY ArfGap/RecO-like zinc finger 15 126 IPR037278 -
Lan5g0466 236 MobiDBLite consensus disorder prediction 178 211 - -
Lan5g0466 236 MobiDBLite consensus disorder prediction 132 150 - -
Lan5g0466 236 SMART arf_gap_3 16 132 IPR001164 GO:0005096
Lan5g0466 236 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0466 Lan-Chr5 10040559 10044894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0466 22 119 C2H2 Transcription Factor Family AT4G05330 50.962 4.12e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0466 K12486 - gmx:100802691 350.903