Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0456 ATGAGCTTGTTCTTTAACATAAGCTTTTGCTATGTGATCATATTATCAATTTTCTTGAACATGTTCTTGTGTGTTGAAACTGATCTGAAAGATTTTCAAGTAGAAGAAAGAGATGCTTTATTGCTCATAAGGGATTCTTTAAATTCTTCTTCTGATTTGCTTGTGAATTGGACAGGTTCTCCTTGTATAGAAAATATTAGTAGATGGTTTGGTATAAATTGTTCCAATTTGCATGTTGTTCACATTGTCCTTGAAGGGATTAACCTTAGTGGCTCTTTACCTCCTAGATGCTTTCAGAACATAACTTTCTTGAGCCAAATCAACTTCAGAAACAATGCAATTTTTGGTCCACTTCCAAATCTCACAAATTTGATGTTTTTGGAACAAGTGATTCTCTCAAATAATCACTTTTCAGGGCCAATTCCTTTGGACTATGTTGAACTTCCTATTCTAGAAGTGTTGGAGCTGCAAGAAAATTACTTGGATTGGCAAATTCCACCCTTTGATCAACCATCATTGACAAGTTTCAATGTGTCCTACAATCATCTGGTAGGGCCAATTCCTGAGACTTCCGTGTTCCAAAGGTTCCGAAAGAGTTCGTTCGATAACAATTCCGATATTTGTGGAATTCCATTGGATACTATATGCCCTGCTGCTCCATCTCCTGCTCCAAGCTCAGAAGTAGAAAAAAATAAGAAGAGATTCCATGTTTGGATCATTGCTCTGATTGCTGCTGCAGCTGCACTATTTCTCTTCCTGATCATTATTGCTATCCGGTTTAACAAGCGATCGAGCGAAAAAGAAACAAGAAGACATGGTTCAGCAAGGTATGTTTTCGGAGCATGGGCAAAGAAGATGGTGACTTATGCTGGGACCAGTGAAGATTCAGAAGGATTAGGCAGGTTGGAATTTTGCAACAAGAAATTTGCAGTTTTTGACATAGATGATTTGTTAAGGGCATCAGCAGAAGTGTTAGGAAAAGGAAATTTAGGTATGACATACAAAGCAACACTTGAAAATGGTATAGCTATTGCAGTAAAGAGACTTAATTACATGAATGAATTGAGCAGTAGGGAATTTCAACAGCAGATGCAATTGCTAGGAAAAATGAGGCATAAGAATGTAGTAGAAGTTGTTTCCTTTTATTATTCAGAGGAGCAGAAGTTGGTCATATATGAACTTATCTCTGATGGCACATTGTTTGAGCTCTTACATGAGGGTAGAGGAATTGGAAGAATAACTCTTGATTGGACCACAAGACTAGCTATTATCAAAGACATTGCAAAGGGTCTTGATTTCCTTCACCATTCAATGTCTTCTCACAAGGTCCCTCATGCCAATCTCAAATCATCCAATGTCCTAATCCATCAAGATAACCAAGGTTACCATTCCAAGCTCACAGACTATGGCTTCTTACCTCTACTTCCATCTAAACTTTATGCAGAAAAGTTAGCCATAAGTAAGGCACCAGAATTTTTTCAAGCAAAGAAGTTGACACACAAAAGTGATGTATATTGCTTTGGTATCATTATCCTAGAGATTATAACAGGAAAAATTCCTGGTCAAATCCTAGGAGAAATTGAAGAAACAACTAATGATCTTTCAAGTTGGGTAAGAAATGTTGTGAGCAATGATTGGTCCACAGATATACTTGATCTAGAAATACTAGCAGAAAAAGAAGGGCATGATGCAATGTTGAAGCTTACAGAGTTAGCTCTTGAGTGTACTGATGTGACACCAGAAAAAAGGCCTAAGATGAGTGCAGTGTTGAGGAGAATAGAAGAGTTAGAGCAAATGGAATTAGAGAATGACTGA 1815 0.3741 MSLFFNISFCYVIILSIFLNMFLCVETDLKDFQVEERDALLLIRDSLNSSSDLLVNWTGSPCIENISRWFGINCSNLHVVHIVLEGINLSGSLPPRCFQNITFLSQINFRNNAIFGPLPNLTNLMFLEQVILSNNHFSGPIPLDYVELPILEVLELQENYLDWQIPPFDQPSLTSFNVSYNHLVGPIPETSVFQRFRKSSFDNNSDICGIPLDTICPAAPSPAPSSEVEKNKKRFHVWIIALIAAAAALFLFLIIIAIRFNKRSSEKETRRHGSARYVFGAWAKKMVTYAGTSEDSEGLGRLEFCNKKFAVFDIDDLLRASAEVLGKGNLGMTYKATLENGIAIAVKRLNYMNELSSREFQQQMQLLGKMRHKNVVEVVSFYYSEEQKLVIYELISDGTLFELLHEGRGIGRITLDWTTRLAIIKDIAKGLDFLHHSMSSHKVPHANLKSSNVLIHQDNQGYHSKLTDYGFLPLLPSKLYAEKLAISKAPEFFQAKKLTHKSDVYCFGIIILEIITGKIPGQILGEIEETTNDLSSWVRNVVSNDWSTDILDLEILAEKEGHDAMLKLTELALECTDVTPEKRPKMSAVLRRIEELEQMELEND* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0456 604 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
Lan5g0456 604 Pfam Protein tyrosine and serine/threonine kinase 323 592 IPR001245 GO:0004672|GO:0006468
Lan5g0456 604 Gene3D Phosphorylase Kinase; domain 1 288 394 - -
Lan5g0456 604 Gene3D Ribonuclease Inhibitor 33 217 IPR032675 -
Lan5g0456 604 SUPERFAMILY Protein kinase-like (PK-like) 323 593 IPR011009 -
Lan5g0456 604 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 11 598 - -
Lan5g0456 604 SUPERFAMILY L domain-like 35 210 - -
Lan5g0456 604 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 598 - -
Lan5g0456 604 Gene3D Transferase(Phosphotransferase) domain 1 395 604 - -
Lan5g0456 604 ProSiteProfiles Protein kinase domain profile. 319 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0456 Lan-Chr5 9889806 9892610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0456 67 600 Receptor kinase-like Gene Family AT5G05160 34.142 1.49e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan5g0456 PK_Tyr_Ser-Thr 4.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0456 - - gmx:102668068 838.18