Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0447 ATGGCTTTAGGAAAATCAAGTAAACTTCCACAAAAAACATTTCTTAAGGAAATTCTCAAGAGATGCTCAAGTCTAGGGAAGAAACAAGGCTATGATCATGATCAAGGGGTCTGTTTGGATGTTCCAAAAGGTCACTTTGTTGTATATGTTGGAGAAAACAGAAGCAGGTATATTGTTCCAATATCTATTCTAAGTAGACCAGAGTTTCAAACCTTGCTTCATAAAGCTGAAGAAGAGTTTGGATTTGATCATGAAAAGGGTCTCATAATTCCTTGTGATGAAGATGTTTTTGAGTCTCTTACATCCATGCTAAGATGCAATTGA 324 0.358 MALGKSSKLPQKTFLKEILKRCSSLGKKQGYDHDQGVCLDVPKGHFVVYVGENRSRYIVPISILSRPEFQTLLHKAEEEFGFDHEKGLIIPCDEDVFESLTSMLRCN* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0447 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 105 IPR003676 GO:0009733
Lan5g0447 107 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 105 - -
Lan5g0447 107 Pfam Auxin responsive protein 35 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0447 Lan-Chr5 9786255 9786578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0447 3 106 Calmodulin-binding Proteins AT4G34750 39.048 8.58e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0447 K14488 - gmx:100305700 169.859