Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0414 ATGTTCACTAATTCTCACCAAGTTATGAGAACCTTAGCACCTTTGAAAGAACCAGACCTAACCTTAAACATAAGCCTACCCTTTATTTCAGATTCTCAACCCAAAGTGGGAAGCTATAATAAAACCCTTTACAATGATATGTGCTCAACTTCTGAGTCAGGTAGTAGTGGAAGTGATTTAAGCCATGAGAATAATAACAATAATAGCTTTTTCCAACTTGGTCATCATCATAGTGAACCCTCTCTGAGATTAGGCTTTGAAACCACATGTTTGAATTTAAAACCCCTTATTCCATTACAACAAGGAGTCTCAAGAAATTCCAACCACTATTTCCAACCACATTTTTATGGCAGAGATTTCAAACGAAATGTGAGAATTGTTCATGGTATGAAAAGGAATGTTAGAGCTCCTAGGATGAGATGGACCACCACCCTCCATGCCCATTTTGTTCATGCAGTTCAGCTACTTGGTGGCCATGAAAGGGCAACTCCAAAATCTGTTTTAGAGTTGATGAATGTTAAGGATCTAACCCTAGCACATGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGTCAAAGGCACAGGTCCTGGACAGATTACACATATGGGATTAAGCAGCACAAAGCAAGAGATTACCAATAATCTGCATAATGGAGTTTCAACTTGTGATGTGAGAACCAATTTACCACACCCTCTGGAAAAAATCCACAGGACACAGTGGAAATCAACAATAGAGACAAATACAAACAATAGTAGACAAAACCTCGAAATGGGTTTGATATATTCTCATCTCATGGGAAATGAAACCATGATTCATGAGCAAAATTATGGAGCCTTGTCGAATTGCATGGAGGAGACATTGGATTGTAGCCCTTTGTCACGTTCTGAAGCGATTCTTGATTTAGAATTCAGCCTTGGAAGGTCCAATTGGGAAGCAGAAAAATGCTGA 960 0.3917 MFTNSHQVMRTLAPLKEPDLTLNISLPFISDSQPKVGSYNKTLYNDMCSTSESGSSGSDLSHENNNNNSFFQLGHHHSEPSLRLGFETTCLNLKPLIPLQQGVSRNSNHYFQPHFYGRDFKRNVRIVHGMKRNVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTVKGTGPGQITHMGLSSTKQEITNNLHNGVSTCDVRTNLPHPLEKIHRTQWKSTIETNTNNSRQNLEMGLIYSHLMGNETMIHEQNYGALSNCMEETLDCSPLSRSEAILDLEFSLGRSNWEAEKC* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0414 319 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 316 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lan5g0414 319 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 316 - -
Lan5g0414 319 Pfam Myb-like DNA-binding domain 138 189 IPR001005 -
Lan5g0414 319 Gene3D - 136 193 - -
Lan5g0414 319 SUPERFAMILY Homeodomain-like 134 191 IPR009057 -
Lan5g0414 319 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 137 190 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0414 Lan-Chr5 9018713 9023176 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0414 18 233 G2-like Transcription Factor Family AT5G42630 52.995 3.18e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan5g0414 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0414 - - gmx:106795723 343.969