Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0393 ATGAAGAAGAAGTGTGAGTTATGCAATTTTCCAGCCACAACTTTCTGTGACTCAGACCAAGCTACCTTATGCTGGAACTGCGATTCAAAAGTTCACACTGCCAATTTCTTAGTCGCTAGGCACACGAGGACCCTTCTCTGCCACACGTGCCACTCTCTCACGCCGTGGAAAGCCTCCGGCGCAACCACCGGCAACGCTGTTTCGCTTTGTGTGGGTTGCGCCGGTGGAACTAGGATTCATGGTGATGAAGGGGAAGAGAGTGAGGGAGATAATGGTGATGAGTTAGAGAGGTTGGAGGAGGATGGAGATAATCAGGTTGTTCCTTGGTCTTCTACGGCCACGGCGCCACCGGATTGTAAGTTATTCGGCAGTGAAGGGTCTGTTACACGGTGCGGCTACGGCGATGAGGATGTTTCTGAATCGGCCGTGATAGTTTCGGTGAAACGACGTCGTCAGGATCATGATATCCAGGAAGGTTCGAAACGGAGAAACGAGTACGCTGGAAACCGGAGAGATCAAGTTGATTACAGCGGTGAACCGCAGTTGAAGGTGTCGCCGGCGACAGCCATGGATATATTGAGTGGTTCACGTGGTTATTGTGATAGTAGAGAATCTGAAGACCGTTGA 627 0.5088 MKKKCELCNFPATTFCDSDQATLCWNCDSKVHTANFLVARHTRTLLCHTCHSLTPWKASGATTGNAVSLCVGCAGGTRIHGDEGEESEGDNGDELERLEEDGDNQVVPWSSTATAPPDCKLFGSEGSVTRCGYGDEDVSESAVIVSVKRRRQDHDIQEGSKRRNEYAGNRRDQVDYSGEPQLKVSPATAMDILSGSRGYCDSRESEDR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0393 208 SMART bboxneu5 1 46 IPR000315 GO:0008270
Lan5g0393 208 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Lan5g0393 208 CDD Bbox1_BBX-like 4 46 - -
Lan5g0393 208 MobiDBLite consensus disorder prediction 149 172 - -
Lan5g0393 208 PANTHER - 3 171 - -
Lan5g0393 208 MobiDBLite consensus disorder prediction 149 208 - -
Lan5g0393 208 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0393 Lan-Chr5 8523647 8525562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0393 1 117 C2C2-CO-like Transcription Factor Family AT4G27310 41.463 5.82e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan5g0393 zf-B_box 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0393 - - lang:109338335 269.24