Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0392 ATGATTCTTGACAATGGTTCAAAAGTTTGGGTCCAAGACAAGGATTTGGCTTGGGTTGCTGCTGAAGTAATCGACTCTTCTAGTAACCGCATCATCAACCTCGTAACCGTTTCCGGGAAGAAGGTTGTTGCTCCACCGGAGGATCTGTTGCCGAGGGATGTCGATGAAGACGAGCATGGTGGAGTTGAAGATATGATCAAGTTGACTTACTTGAATGAGCCAGGAGTGTTGTACAATCTTCGTAGAAGATATGAACTCAATGATATCTATACATATACAGGGAGCATTTTAATAGCTGTTAATCCCTTCACAAAGATTCCTCATTTGTATGATACCCATATGATGGAGCAATATAAGGGAGCTCCACTTGGTGAGCTAAGCCCTCATGTTTTCGCTGTCACAGATGCATCTTATAGAGCAATGATGAATGAAGGTAAAAGCCAATCTATCTTGGTCAGCGGTGAAAGTGGTGCTGGGAAAACTGAGACGACAAAATTGATTATGCAATATCTTACCTATGTTGGTGGACGTGCTGCTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCGCTTTTAGAGGCATTTGGTAATGCAAGGACTGTCAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGAAGAATATCTGGTGCTGCAATTCGAACTTACTTACTGGAAAGATCACGCGTAGTTCAGATAACAGACCTAGAAAGAAATTACCACTGTTTTTATCAGTTGTGTGCATCTGAAAGGGATGCAGAGAAGTATAAGTTAGCACATCCAAGCCATTTCCACTATTTAAATAAAAGTAAAATCTTTGAACTAGATGGTGTAAGCAATGCTGAGCAATATGTGAATACGAGGAGGGCAATGGATGTTGTTGGCATAAGTCATGAGGATCAGGAAGCCATATTTCGTGTCTTAGCTGCAATCTTACATCTGGGAAACATTGAATTTTCTCCTGGAAAAGAGCATGACTCGTCAGTAATAAAAGATGAAAAATCAAGATTTCATATGCAGATGGCTGCTAACCTTTTCATGTGTGATGTAGACCTACTACTAACAACATTGTGCACCCGTTCCATAAAAACCCGGGAAGGAAGTATTGTCAAAGCCCTTGATTGCAATGCTGCTGTTGCTGGTCGGGATGCTTTGGCAAAAACTGTTTATGCTCGTTTATTTGATTGGCTTGTGGACAAGATCAATAGGTCTGTTGGGCAAGATATTAATTCACAGATGCAAATTGGAGTTCTGGATATTTATGGTTTTGAATGCTTCAAGAATAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTCCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAGTACGGAAAAGAAGAAATTAACTGGAGTTACATTGAATTTGTAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATTATTGCTCTGTTGGATGAAGCCTGCATGTTTCCGAAATCGACGCATGAATCATTCTCAACCAAATTGTTTCAGCATTTTAGGTCTCACCCTAGGTTGGAAAAGGAAAAGTTTTCACAAACAGATTTTAGCATGTCCCATTATGCTGGAAAGGTTACTTATCATACAGATACCTTCTTATACAAAAACCGTGATTATGTTGTTGTAGAACATTGTAATCTATTATCTCCTTCAAAATGCCCCTTTGTGTCTGGTCTTTTTCCTCTGTTAGCAGAGGAATCATCAAGATCATCGTTCCAGTTTTCTTCTGTGGCCTCTAGATTTAAGCAACAACTTCAAGCACTCATGGAGACCCTCAAGTCAACAGAGCCTCATTACATACGATGTGTGAAGCCAAACTCTTTGAATCAACCACAAATGTTCGTGAATGCTAGTGTCATACACCAATTGCGCTGTGGGGGCGTCCTTGAGGCTGTTCGGATAAGTTTGGCAGGTTACCCTACTCGAAGGACTTACTCAGAGTTCATAAATCGCTATGGGGTAATTGCCCTTGAATTTATGGATGGGAGTCATGATGATAAAGGTGCAACTGAGAAAATTTTGCGAAAGCTCAAGCTTGAGAATTTTCAGTTGGGTAGGAGCAAAGTATTCCTCCGGGCTGGTCAAATTGGCATTTTAGACTCCAAACGTGCTGAAATTTTGGACTATGCTGCAAAGCGTATTCAGCACTGCCTGAGGACATTTGTTGCACGCAGATATTTCATCTCAGTTAAAGCAGCAGCAGTTTCTCTACAGACATGCTGTAGGGGGTGCATTGCCAGAAAGATGTATGCTGCTATACGGGAGACAGCAGCAACTATCTCCATTCAGAAATATATTCGTATGTGGCTAATGAGGCAGGCTTACTTAAAACTATATTCTCCTACTATTATTATACAATCCCATGTTCGTGGTTTCACGGCTCGCCAAAGATTATTGCATGGAAGAGAACATAAAGCTGCTACATTTATCCAGGCCTGTTGGAGGATGTCCCAGGTTAGATCATCCTTCCACCAATATCAAGCTTCAATTGTGGCAGTCCAATGCCTTTGGCGGTGTAGGCAAGCAAGAAGAGAGCTTCGTAGACGTAAACAAGAGGCTAATGAATCTGGTGCCCTACGTTTAGCTAAGAGTAAACTTGAGAGGCAATTGGAAGAGCTCACTTGGCGTTTGCAACTTGAAAAGAAAATAAGGGTTTCTAATGAAGAGTCTAAGCAAGCAGAGATTTCCAGACTTCAAAAGGTGTTAGAAGCTCTGAATGTGGAATTAGATATGGCTAAATTGGCAACAACCAATGAGTGCAACAAGAATGCAGTTCTACAAAATCAATTGGAATCATCAGTAAAGCAAAAAATTGCTTTAGAAAGAGAGTTAGTTGCAAGGGAGGAAGTTCAAAAGGAAAATGCTTTGCTAAAGGGTTCTTTGGATGCCTTTGAAAAGAAGCATGCAGCGTTGGAGCTTGAGCTTACGAATGCTCAGAAAGGCCACAATGAGACCACTGAGAAATTAAGAGAGTTTGAGCAGAAGTGTTCTCAACTTGAGCGAAATGTGATAAGTCTTGAGGGAAAGGTGTTGAGTTTAGAGGATGAAAATCATGCACTTGGTCAGAAAGCCTTCAGTACTCCTCCTAAGAGTAGCCGTACAGGTCTTGCCAAGTCATGTTCAGAAAAGCACTCAAGTGCAATAGCCTCCTGCACTGAGAGAAAGCCCTCATTCGAGTCTCCCACACCTACAAAACATATTCCCCCCTTTGCACTAGGCATGTCTAAGTCTCATCGATCTAAGTTAACCACAGAGAGGAATCAGGATAACTATGAATTCCTCTCTAGGTGTATCAAAGAAAACTTGGGATTCAAAAACGGCAAACCTCTGGCAGCTCGTATAATATACAAAAGTCTTCTTCATTGGCATGCTTTTGAATCTGAGCGCACAACCATTTTTGATTACATAATTGAAGGCATAAATGATATTCTAAAGGTTAGGGATGATGGCTTTGTCTTGCCTTATTGGCTGTCCAATACCTCTGTGCTTCTATGCCTTTTACAGCGGAACATACGTTCAAATGGCTTTTTAACTACGGCTACTCAACGTCATACTGGATCTTCTGGCTTTACCAGCCGGACAGGGCAAGGACTTAAATCTCCATTGAAGTCTCTTGGATACGATGATGGTATGTCACATGTGGAGGCGAGATATCCAGCTATACTTTTTAAGCAACAACTCACTGCTTGTGTAGAGAAGATTTTTGGCTTTATACGTGACAACTTGAAAAATGAACTTTCTCCACTTCTGGGATCATGTATTCAGGCACCTAAAACAGGACTATTGCATGGTGGAAAATCGTCTAGATCTCCTGGTGGACTTCCTCAACAATCACCTGGTGGCCAATGGGACAAAATTGTCAACTTTTTGGAGTCACTCATGGTCCAACTACGTGCAAATCATGTGCCATCCTTCTTCATACGTAAGCTAGTTACCCAAGTTTATTCATTCATTAATATCACACTCTTTAACAGTCTTCTCTTGCGGCGTGAATGTTGCACATTTTCGAATGGTGAATATGTGAAGTCTGGTCTTGCAGAACTTGAGAAATGGATAGCCAATGCTAAGGAGGAGTATGCAGGAACATCCTGGCACGAGCTGAATTATATTAGACAAGCTGTTGGGTTCTTGGTAATACACCAGAAGAGAAAGAAATCTTTGGAAGAGATTCGGCAGGACCTTTGTCCGACATTAACGGTGAGACAAATCTATCGTATCAGTACTATGTACTGGGATGACAAGTATGGAACCCAAAGTGTGTCTAATGAGGTAGTTGGTGAGATGAGGGAACTTGTGGGCAAGGACAATCAAAGTCTTGCTTCAAATTCTTTCTTGTTGGATGATGATCTAAGCATTCCTTTCTCTGCTGAAGACATAGATATAGCAATTCCTGCTATAGATCATGATGATATTGATCTTCCACCATTCTTGTCCGAATATCCTTGTGCCCAGTTTCTTATATCACATCAAAAGTAA 4554 0.408 MILDNGSKVWVQDKDLAWVAAEVIDSSSNRIINLVTVSGKKVVAPPEDLLPRDVDEDEHGGVEDMIKLTYLNEPGVLYNLRRRYELNDIYTYTGSILIAVNPFTKIPHLYDTHMMEQYKGAPLGELSPHVFAVTDASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTYVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDLERNYHCFYQLCASERDAEKYKLAHPSHFHYLNKSKIFELDGVSNAEQYVNTRRAMDVVGISHEDQEAIFRVLAAILHLGNIEFSPGKEHDSSVIKDEKSRFHMQMAANLFMCDVDLLLTTLCTRSIKTREGSIVKALDCNAAVAGRDALAKTVYARLFDWLVDKINRSVGQDINSQMQIGVLDIYGFECFKNNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEINWSYIEFVDNQDVLDLIEKKPIGIIALLDEACMFPKSTHESFSTKLFQHFRSHPRLEKEKFSQTDFSMSHYAGKVTYHTDTFLYKNRDYVVVEHCNLLSPSKCPFVSGLFPLLAEESSRSSFQFSSVASRFKQQLQALMETLKSTEPHYIRCVKPNSLNQPQMFVNASVIHQLRCGGVLEAVRISLAGYPTRRTYSEFINRYGVIALEFMDGSHDDKGATEKILRKLKLENFQLGRSKVFLRAGQIGILDSKRAEILDYAAKRIQHCLRTFVARRYFISVKAAAVSLQTCCRGCIARKMYAAIRETAATISIQKYIRMWLMRQAYLKLYSPTIIIQSHVRGFTARQRLLHGREHKAATFIQACWRMSQVRSSFHQYQASIVAVQCLWRCRQARRELRRRKQEANESGALRLAKSKLERQLEELTWRLQLEKKIRVSNEESKQAEISRLQKVLEALNVELDMAKLATTNECNKNAVLQNQLESSVKQKIALERELVAREEVQKENALLKGSLDAFEKKHAALELELTNAQKGHNETTEKLREFEQKCSQLERNVISLEGKVLSLEDENHALGQKAFSTPPKSSRTGLAKSCSEKHSSAIASCTERKPSFESPTPTKHIPPFALGMSKSHRSKLTTERNQDNYEFLSRCIKENLGFKNGKPLAARIIYKSLLHWHAFESERTTIFDYIIEGINDILKVRDDGFVLPYWLSNTSVLLCLLQRNIRSNGFLTTATQRHTGSSGFTSRTGQGLKSPLKSLGYDDGMSHVEARYPAILFKQQLTACVEKIFGFIRDNLKNELSPLLGSCIQAPKTGLLHGGKSSRSPGGLPQQSPGGQWDKIVNFLESLMVQLRANHVPSFFIRKLVTQVYSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIANAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPTLTVRQIYRISTMYWDDKYGTQSVSNEVVGEMRELVGKDNQSLASNSFLLDDDLSIPFSAEDIDIAIPAIDHDDIDLPPFLSEYPCAQFLISHQK* 1518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0392 1517 CDD MyosinXI_CBD 1111 1483 IPR037975 GO:0007015
Lan5g0392 1517 SMART iq_5 780 802 IPR000048 GO:0005515
Lan5g0392 1517 SMART iq_5 755 777 IPR000048 GO:0005515
Lan5g0392 1517 SMART iq_5 803 825 IPR000048 GO:0005515
Lan5g0392 1517 SMART iq_5 732 754 IPR000048 GO:0005515
Lan5g0392 1517 SMART iq_5 828 850 IPR000048 GO:0005515
Lan5g0392 1517 SMART iq_5 851 873 IPR000048 GO:0005515
Lan5g0392 1517 Coils Coil 914 941 - -
Lan5g0392 1517 MobiDBLite consensus disorder prediction 1077 1097 - -
Lan5g0392 1517 Pfam DIL domain 1336 1439 IPR002710 -
Lan5g0392 1517 Gene3D Kinesin motor domain 63 660 IPR036961 -
Lan5g0392 1517 PANTHER PROTEIN OPAQUE1-LIKE 4 1514 - -
Lan5g0392 1517 Gene3D - 250 307 - -
Lan5g0392 1517 PANTHER MYOSIN 4 1514 - -
Lan5g0392 1517 SMART DIL_2 1335 1442 IPR002710 -
Lan5g0392 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 783 IPR027417 -
Lan5g0392 1517 SMART MYSc_2a 54 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan5g0392 1517 PRINTS Myosin heavy chain signature 90 109 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan5g0392 1517 PRINTS Myosin heavy chain signature 147 172 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan5g0392 1517 PRINTS Myosin heavy chain signature 194 221 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan5g0392 1517 PRINTS Myosin heavy chain signature 426 454 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan5g0392 1517 PRINTS Myosin heavy chain signature 479 507 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan5g0392 1517 Coils Coil 949 969 - -
Lan5g0392 1517 Gene3D Myosin VI head, motor domain, U50 subdomain 309 599 - -
Lan5g0392 1517 ProSiteProfiles IQ motif profile. 804 833 IPR000048 GO:0005515
Lan5g0392 1517 Gene3D - 831 880 - -
Lan5g0392 1517 Gene3D - 733 782 - -
Lan5g0392 1517 Gene3D - 783 830 - -
Lan5g0392 1517 Gene3D - 436 621 - -
Lan5g0392 1517 Coils Coil 973 1042 - -
Lan5g0392 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 824 879 IPR027417 -
Lan5g0392 1517 ProSiteProfiles Dilute domain profile. 1160 1460 IPR002710 -
Lan5g0392 1517 ProSiteProfiles IQ motif profile. 757 785 IPR000048 GO:0005515
Lan5g0392 1517 Pfam IQ calmodulin-binding motif 830 850 IPR000048 GO:0005515
Lan5g0392 1517 Pfam IQ calmodulin-binding motif 783 801 IPR000048 GO:0005515
Lan5g0392 1517 Pfam IQ calmodulin-binding motif 809 824 IPR000048 GO:0005515
Lan5g0392 1517 Gene3D - 664 731 - -
Lan5g0392 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 781 826 IPR027417 -
Lan5g0392 1517 ProSiteProfiles IQ motif profile. 829 858 IPR000048 GO:0005515
Lan5g0392 1517 ProSiteProfiles IQ motif profile. 852 881 IPR000048 GO:0005515
Lan5g0392 1517 CDD MYSc_Myo11 74 718 IPR036018 -
Lan5g0392 1517 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 54 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan5g0392 1517 ProSiteProfiles IQ motif profile. 781 808 IPR000048 GO:0005515
Lan5g0392 1517 Pfam Myosin head (motor domain) 62 718 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan5g0392 1517 Coils Coil 889 909 - -
Lan5g0392 1517 ProSiteProfiles Myosin motor domain profile. 60 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0392 Lan-Chr5 8439257 8478939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0392 3 1513 Myosins gene family AT4G33200 70.503 0.0 2199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0392 K10357 - gmx:100790815 2500.7