Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0376 ATGGCAATTCAACAATATACTTGTGTCATATTAAGGGTTAGCTTCTGCATTGTCTTTGTTCTTAACCTTGTGGCAGCTACTAGCATTGAAGAAAAGAATGAAGCACAAGAAGAATTCATTGGCCAACTATTTGATCCTGCATCTGGAATGTTAAATGAGGACACGGCGGAGATATTATGGACCACTTGCTGGGAAGATTTGATTCATTTAAAGAAAGAATTCGGAGATCTTGACTTATGCCTCTTACTGGAATCATCATGTAGTAGCAATGAAATTAGTTCAGAAATTGGACCAATAGCACAACAAAACATCCAAAAATTCATCAATACTTGCCATCCTCAGTTGAAGGGAGTTTTTCTGCACTGTTTGAGAAAAAAGAAACTTCCACTCCATGTTTCTGGAGAAGATAAGGAATTCCTTTCTTCCAGAAGAAAATTAGGTTATATTTTGCACCAACGCATATCAGAACTACCAAATGGAGCATCCAAAAATGATCCTGAAAGTAATAAATCAAAAACTAAGTCCAAGGATTCTGACCACAAAAAATCAGTTGGTACTGTTGTAGCTATAACTGCAGTGATTGCATTTGTATTTGCAATACTGCTCTTTTTATGTTGTTGTGGGAAAGGCCGAGTTAGTCAAACTGATGAGAGGCCCCTTCTCAGCTTGAGCATGAGTGACTGCTCTGTTGCTTCTTCTTCCAATAATAATGCATATCAAAATCAAAGTTCCATAAAAGATGAAAACCCTGGGTTTCAGTTATCCGGAGATACTTCGCCTCATGACATGAAGAGCTCAGTGCAGGAAAATCAAGCAGCAGGATCTGCAAGCCCATCATTTGAACTGAAACTTCCTCCCGGGAGGGTTGGACCCACACCTGGAATGGCTCCTTTGAAACCTCCTCCTGGCAGACATGTGCCTCTTCCATCAAAGCCTTCTGATAGTGCCACTGCTGCTCCTCCTCCCCCTCCTCCTGCACCACCACAGCCACCCAGTGGTGGACCTCCACCTCCTGCACCCCCACCGCCTCGTGGTGTTGGCCCTCCGCCTCCTCGGCCTCCTCCACCACGTGGCCCAAGACCACCACCACTTCCTAAGGGTGGTGTAGCTCGTCCTTCATCAATTGATCAAAAGGGAGCTCGCCCCTTAGGTGGTGGACAAAACGTTCAAAACAATGATGGAGGTGATTCAGAAGGTGAAGCTGATGCTCCTAAAGCCAAGTTAAAGCCTTTTTTCTGGGATAAGGTTCAAGCCAACTCTGATCAAGCAATGGTTTGGAATCAGATAAAAGCAGGATCATTCCAGTTTAATGAAGAAATGATGGAGTCACTTTTTGGCTATGCTGCTACTGCTGAAAAAATCAAAGTCGGCCAGAACAAGAAAGAGTCTACCTCCCATGATCAATCACGACAGTATATCCTGTTAATTGACTCAAAGAAATCACAAAATTTATCAATTCTGTTGCGAGCACTGAATGTAACACAGGAAGAAGTTTGTGATGCACTTCTTGAAGGTAATGAGCTTCCCTCGGAATTCCTTCAAACCTTGCTGAAGATGGCACCAACACAAGAGGAAGAACTCAAGCTTAGACTTTTCAGTGGTAACCTCGCGCAACTTGGACCAGCTGACCGGTTCCTGAAAGCTTTAGTTGACATTCCATTTGCATTTAAACGAATGGAAGCACTGCTTTACATGGGTATTCTTCAAGAGGAGCTCAAAGCTACCATGGAGTCGTTTGCAGTTTTAGAGATTGCTTGTAAGGAACTAAGAAGCAGCAGGCTGTTCTTGAAGCTTCTAGAAGCTGTTCTTAAAACTGGAAACCGTATGAATGATGGGACATTCCGTGGTGGTGCACAAGCATTTAAGCTTGACACGTTACTGAAATTGTCAGATGTAAAAGGAGTAGATGGCAAGACTACTCTATTACACTTTGTGGTTCAAGAGATAATGCGCACCGAGGGTATAAGAGCTGCTCGTATGGCAAAAGAAAATCGTAGTTTCTCTAGTCTTAAAACAGATGACCTTCTTGAAGACGTTTCTTATGAGTCAGAAGACCTTTATCGCGAGCTTGGTCTTGAGGTTGTATCACGTTTGAGCAGTGAACTTGAGAATGTTAAGAAAGCAGCAGCTCTAGATGCTGAGACCTTAACAGGAACTACTGCCAGACTTGGCCATGGTCTCGTAAATGCCATGGATTTTGTTAACAACGATCTTAAGAACTCAGAGGGTGATGATAGAGGGTTCGTAGAGACGGTGAAGAGTTTTTTGGAGAGTGCTGAGATTGATGTCACGAGTCTATTGGAAGAAGAGAAGAAAATCATGGCTCTAGTGAAGAGCACTGGTGATTACTTCCATGGGAATTCCGGTAGAGATGAAGGTTTAAGATTGTTTGTAATAGTCCATGATTTCTTAATAATGGTGGATAAGGTATGCAAGGAGATAAGACTTACACCAAAGAAGCCATCAGCAAAACATGTCAAACAAGAGACTTCTAGTTCTAGAAGGTCATCATCTTCAGAAACTCGCCCTCCACCTTGTGATGTTCGGCAGCGGCTTTTTCCAGCAATCGTAGATAGGAGGAGGAAGGACGACTCTAGTTCCGATGATGAGAGTCCATAG 2619 0.4303 MAIQQYTCVILRVSFCIVFVLNLVAATSIEEKNEAQEEFIGQLFDPASGMLNEDTAEILWTTCWEDLIHLKKEFGDLDLCLLLESSCSSNEISSEIGPIAQQNIQKFINTCHPQLKGVFLHCLRKKKLPLHVSGEDKEFLSSRRKLGYILHQRISELPNGASKNDPESNKSKTKSKDSDHKKSVGTVVAITAVIAFVFAILLFLCCCGKGRVSQTDERPLLSLSMSDCSVASSSNNNAYQNQSSIKDENPGFQLSGDTSPHDMKSSVQENQAAGSASPSFELKLPPGRVGPTPGMAPLKPPPGRHVPLPSKPSDSATAAPPPPPPAPPQPPSGGPPPPAPPPPRGVGPPPPRPPPPRGPRPPPLPKGGVARPSSIDQKGARPLGGGQNVQNNDGGDSEGEADAPKAKLKPFFWDKVQANSDQAMVWNQIKAGSFQFNEEMMESLFGYAATAEKIKVGQNKKESTSHDQSRQYILLIDSKKSQNLSILLRALNVTQEEVCDALLEGNELPSEFLQTLLKMAPTQEEELKLRLFSGNLAQLGPADRFLKALVDIPFAFKRMEALLYMGILQEELKATMESFAVLEIACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVQEIMRTEGIRAARMAKENRSFSSLKTDDLLEDVSYESEDLYRELGLEVVSRLSSELENVKKAAALDAETLTGTTARLGHGLVNAMDFVNNDLKNSEGDDRGFVETVKSFLESAEIDVTSLLEEEKKIMALVKSTGDYFHGNSGRDEGLRLFVIVHDFLIMVDKVCKEIRLTPKKPSAKHVKQETSSSRRSSSSETRPPPCDVRQRLFPAIVDRRRKDDSSSDDESP* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0376 872 ProSiteProfiles Formin homology-2 (FH2) domain profile. 398 833 IPR015425 -
Lan5g0376 872 MobiDBLite consensus disorder prediction 290 368 - -
Lan5g0376 872 MobiDBLite consensus disorder prediction 853 872 - -
Lan5g0376 872 MobiDBLite consensus disorder prediction 231 403 - -
Lan5g0376 872 MobiDBLite consensus disorder prediction 819 872 - -
Lan5g0376 872 SMART it6_source 398 822 IPR015425 -
Lan5g0376 872 MobiDBLite consensus disorder prediction 231 277 - -
Lan5g0376 872 MobiDBLite consensus disorder prediction 158 181 - -
Lan5g0376 872 MobiDBLite consensus disorder prediction 167 181 - -
Lan5g0376 872 PANTHER FORMIN-LIKE PROTEIN 1 138 - -
Lan5g0376 872 PANTHER FORMIN-LIKE PROTEIN 316 870 - -
Lan5g0376 872 PANTHER FORMIN-LIKE PROTEIN 164 313 - -
Lan5g0376 872 Gene3D Formin, FH2 domain 404 842 IPR042201 -
Lan5g0376 872 Pfam Formin Homology 2 Domain 400 807 IPR015425 -
Lan5g0376 872 PANTHER FORMIN-RELATED 164 313 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lan5g0376 872 PANTHER FORMIN-RELATED 316 870 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lan5g0376 872 PANTHER FORMIN-RELATED 1 138 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lan5g0376 872 SUPERFAMILY Formin homology 2 domain (FH2 domain) 411 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0376 Lan-Chr5 7767204 7774106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0376 402 860 FH2 protein (formin) Gene Family AT5G54650 65.870 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0376 - - gmx:100792872 723.005