Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0373 ATGAAAGTTGCTTTGAATGAAGCAGCTTCATGGTACATGCTTCGTTTTTTCTTCATTTCTTTATTGAGTTTTAACGTTTGTCATGGAAAGCTAGACTTTAGTGGAACGGACACGGCGGAGGAGGAGGCCAATGCGCTGCCGGACACAGAGCTCGACAGCTGCAACGGCATATTCTTGACGTACACGTTGATATCAAGGGAGAAGGAATACCCGCACGTGAAGAACATGTCAAAACAAGCATGGGCGTTTAAGTCAGAGGCAACGTTGATGAACGTAGGGGATGAGGAGCTTAATGATTGGCAAATGTATATCGGGTTCCAGTATAGCGAGATTCTTGTCTCGGCTGATGGTGCCGTTGCGATAGACGCAGATGACTTTCCTGCGCCTGTCGGAAACGGCACCACATTAGCTGGGAACCCGATGATGGACTTGAAGACTGCCATTGAAACTGCTGGTGATGTTAACCAAATGAGTGTGAAGGTTAAGATGAGTGGGACCCAGTTTGGTTTAGGTAAAGAAGGAAAACCGATGCCTAAGAATATTAAGCTCGTAAATGATGGCTTCAAATGCCCTGCAGCTAGTCGTAAAGGATCAAGAATGTTTGTATGCTGCAAAAAGGACCCAAAAGCTAAGGCCAAGTTATCAAAGAAAACCAAGTTCCCACCTCGTCGCAATGGAGATCTAACCATTGCATACGATGTCCTTCAAGCATTCTCAAACAACTACTTAGCCCAAGTAACCATTGACAACAATCACCCATTGGGTCGTCTTGATCATTGGAACATAACATGGGAATGGCAACATGGAGAGTTCATTAATACCGTAAGAGGTGCCTTTGCACGAATCAAAGACCCTTCTGAGTGTGTCTATGGCCCTGCAGCAAGATACTATGGTGACCTGGATTTCTCACAAGTTGCAAATTGTCAAAAAAAACCTATAATTTCTGATCTTCCATCAGAGAGAAAAGATGATGAGAAAATTGGAAAACTCCCTTGGTGTTGTAGGAATGGTACTGTTTTACCTCCTATTATGGATAAGAACAAGGCAAGGTCTCTTTTTCAGATACAAGTTTTCAAAATGCCACCTGATGATAATAGAACTGAAATTACTCCTCCTATGAAGTGGCACGTTGATGGTGTTATTAACCCTCGATACCAATGTGGCCCACCCATTAGGGTTGACCCTCAAGAGTTTCCTGACCCTAGTGGCCTTAGTGCAATTCAAACAGCTGTGGCTAGTTGGCAAGTGGTTTGTAACATCACAACACCAAAGCCTCAAACAAATAGGTGTTGTGTTTCATTCTCAGCATTTTACAATGAATCTGCTATCCCTTGTAACACTTGTGCTTGTGGTTGTGATGTTACAAGGAAGTGCAATGATAAGGCCTCACCAATGCTTCTACCACCAGATGCTCTTCTAGTCCCTTTTGTAAATAGAACAAAGAAAGCGCTTGCTTGGGCAAAACTCAAACATAATAATGTACCTACCAAATTGCCTTGTGGAGATAACTGTCCAGTTAGCATAAACTGGCATGTTAACACGGATCACAAGGTTGGATGGACAGCGAGGATCACTATTTTCAACTGGGAAGACTATACATTTGATGATTGGTTCACTGCTCTAAAGTTTGATAGGTATTTTGAAGATTTTCAAGATGTGTATTCCTTCAACGGAACTCGAATTCCGGGGCTTAAAACTATCTTCTTGCAAGGTGTGAAGGGTTTGAATTATTTGGCTGGAGAGACAAATGGAACTCATGAGTATGATCCTAGGGTCCCTGGGAAGCAGCAATCTGTACTTTCTTTCAATAAGAAAAATATCAAAGACTTTGATATAACACGTGATGGGTTCCCTACAACGGTGTACTTCAATGGAGAAGAGTGTGCACTTCCTCCTATTAGACCTATGAAGAGTTTAGGGCATCACCGATCTTCCATTAATCTCCTTGCAATCATTATCTCAGCATTTGTGACATTCTTGCTTATGCATTGA 1992 0.4242 MKVALNEAASWYMLRFFFISLLSFNVCHGKLDFSGTDTAEEEANALPDTELDSCNGIFLTYTLISREKEYPHVKNMSKQAWAFKSEATLMNVGDEELNDWQMYIGFQYSEILVSADGAVAIDADDFPAPVGNGTTLAGNPMMDLKTAIETAGDVNQMSVKVKMSGTQFGLGKEGKPMPKNIKLVNDGFKCPAASRKGSRMFVCCKKDPKAKAKLSKKTKFPPRRNGDLTIAYDVLQAFSNNYLAQVTIDNNHPLGRLDHWNITWEWQHGEFINTVRGAFARIKDPSECVYGPAARYYGDLDFSQVANCQKKPIISDLPSERKDDEKIGKLPWCCRNGTVLPPIMDKNKARSLFQIQVFKMPPDDNRTEITPPMKWHVDGVINPRYQCGPPIRVDPQEFPDPSGLSAIQTAVASWQVVCNITTPKPQTNRCCVSFSAFYNESAIPCNTCACGCDVTRKCNDKASPMLLPPDALLVPFVNRTKKALAWAKLKHNNVPTKLPCGDNCPVSINWHVNTDHKVGWTARITIFNWEDYTFDDWFTALKFDRYFEDFQDVYSFNGTRIPGLKTIFLQGVKGLNYLAGETNGTHEYDPRVPGKQQSVLSFNKKNIKDFDITRDGFPTTVYFNGEECALPPIRPMKSLGHHRSSINLLAIIISAFVTFLLMH* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0373 663 Pfam COBRA-like protein 242 421 IPR006918 GO:0010215|GO:0031225
Lan5g0373 663 PANTHER COBRA-LIKE PROTEIN 7 12 662 - -
Lan5g0373 663 PANTHER COBRA-LIKE PROTEIN 10 12 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0373 Lan-Chr5 7696546 7700084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0373 45 662 COBRA Gene Family AT3G20580 61.316 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0373 - - gmx:100789175 1026.54