Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0362 ATGGAGGCTTTCAACAGGAGTAACAGTCACGTTGCAAGCCAAGTTGATTCCACCTTCTGCTTGGGTAATACGAATGATAGTATTGGTGACCCACTCAACTGGGGTGTTGCTGCTGAATCACTCAAGGGGAGCCATTTGGATGAGGTGAAGCGTATGGTGGCTGAGTACCGGAAGCCAGTGGTTCGTCTAGGTGGCGAAACGCTTACGATCTCTCAGGTGGCGGCCATCGCCGCCCATGACCAAGGGGTGAAGGTGGAGCTCTCGGAGTCAGCTAGGGCTGGCGTTAAGGCTAGCAGTGACTGGGTTATTAACAGCATGAAAAATGGCACTGACAGCTATGGTGTCACCACTGGGTTCGGTGCTACCTCACACCGGAGAACCAAACAGGGCGGTGCCTTGCAGAAAGAGCTCATTAGGTTTTTGAATGCTGGAATATTTGGCAATGGTACAGAGTCCAATTGCACCCTACCACACACAGCAACAAGAGCAGCAATGCTAGTGAGAATTAACACTCTTCTCCAAGGGTACTCAGGTATTAGATTTGAAATCTTGGAAGCAATTACAAAGCTCCTTAACAACAACATCACCCCATGCTTGCCACTTAGGGGAACAATTACAGCTTCAGGTGACCTTGTACCCCTGTCCTACATTGCTGGGTTGCTAACTGGCAGACACAATTCTAAGGCTGTGGGGCCCACAGGAAAGATCCTTAATGCCAAAGAAGCTTTTGAGTTGGCAAAAATTGGTCATGAGTTCTTTGAGTTGCAACCCAAAGAGGGACTTGCACTTGTGAATGGCACTGCTGTTGGTTCTGGTTTAGCTTCAATTGTTTTGTTTGATGCAAATGTATTAGCTGTTTTGGCTGAACTTATTTCAGCAATTTTTGCTGAAGTGATGCAAGGGAAGCCTGAATTCACTGACCATTTGACTCATAAGTTGAAGCACCACCCTGGTCAAATTGAAGCTGCAGCAATTATGGAACATATTTTGGATGGAAGCTCTTATGTGAAGGCGGCTAAGAAGTTGCATGAGACTGATTCACTTCAAAAGCCGAAACAAGATCGTTACGCACTTAGAACTTCACCTCAATGGTTAGGTCCTTTGATTGAAGTGATCAGGTTTTCAACCAAGTCAATAGAGAGGGAGATAAACTCAGTCAATGACAACCCTTTGATTGATGTTTCAAGGAACAAGGCCTTGCATGGTGGTAATTTCCAAGGTACTCCAATTGGAGTATCTATGGATAACACTCGTTTAGCTATCGCGTCAATTGGGAAGCTCTTGTTTGCTCAATTCTCTGAGCTGGTCAATGATTTTTATAACAACGGTTTGCCTTCAAATCTCTCTGCTAGTAGAAACCCCAGCTTGGATTATGGTTTCAAGGGAGCTGAAATTGCAATGGCATCCTATTGTTCCGAGCTTCAATATCTTGCAAACCCGGTCACAACCCATGTCCAAAGTGCTGAGCAGCACAACCAAGATGTGAACTCTCTTGGTTTGATTTCATCTAGAAAGACTAATGAATCGATTGAGATCTTGAAGCTCATGTCTTCCACGTTCTTGATCGCGCTTTGTCAAGCAATTGATTTAAGGCATTTGGAGGAGAATTTGAAGAACACTGTCAAGAACACTGTAAGCCAAGTTGCTAAGAGGACTCTTACTACAGGTGTCAATGGAGAACTCCATCCTTCAAGGTTCTGTGAGAAAGAGTTGCTGAAAGTTACTGATAGGGAGTACCTATTTACCTACATTGATGACCCTTGTAGTGGTACATACCCATTGATGCAAAAGCTAAGGCAAGTGCTTGTGGATCATGCATTAGCAAATGCTGAAAATGAGAAAAACTTGAACACATCAACCTTTCAAAAGATTGCAACATTTGAGAATGAGTTGAAGGCTATTTTGCCAAAGGAGGTTGAAAGTACATGGGCTGCATATGAGAATGGCAAATCTGTAATTCCAAACAAGATCAAGGAGTGCAGGTCTTACCCATTGTACAAGTTTGTGAGAGAGGAGTTAGGGACTGGGTTGCTGACTGGGGAAAAGTTAGTGTCACCAGGTGAAGAGTGTGACAAACTGTTCACAGCAATATGCCAAGGCAAAATTATTGATCCTATTCTTGAATGCCTTGGGGGGTGGAATGGTGCTCCTCTTCCAATTTCTTAG 2166 0.4423 MEAFNRSNSHVASQVDSTFCLGNTNDSIGDPLNWGVAAESLKGSHLDEVKRMVAEYRKPVVRLGGETLTISQVAAIAAHDQGVKVELSESARAGVKASSDWVINSMKNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKAVGPTGKILNAKEAFELAKIGHEFFELQPKEGLALVNGTAVGSGLASIVLFDANVLAVLAELISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHETDSLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNESIEILKLMSSTFLIALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKELLKVTDREYLFTYIDDPCSGTYPLMQKLRQVLVDHALANAENEKNLNTSTFQKIATFENELKAILPKEVESTWAAYENGKSVIPNKIKECRSYPLYKFVREELGTGLLTGEKLVSPGEECDKLFTAICQGKIIDPILECLGGWNGAPLPIS* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0362 721 CDD PAL-HAL 66 531 IPR001106 -
Lan5g0362 721 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 30 710 IPR005922 GO:0005737|GO:0006559|GO:0016841
Lan5g0362 721 Gene3D - 534 655 IPR023144 -
Lan5g0362 721 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 203 219 IPR022313 GO:0016841
Lan5g0362 721 Gene3D - 21 267 IPR024083 -
Lan5g0362 721 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 22 720 - -
Lan5g0362 721 Gene3D Fumarase/aspartase (Central domain) 268 716 - -
Lan5g0362 721 Pfam Aromatic amino acid lyase 68 544 IPR001106 -
Lan5g0362 721 PANTHER HISTIDINE AMMONIA-LYASE 22 720 IPR001106 -
Lan5g0362 721 SUPERFAMILY L-aspartase-like 30 720 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0362 Lan-Chr5 7273594 7279066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0362 15 720 Monolignol Biosynthesis Gene Families AT2G37040 81.153 0.0 1211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0362 K10775 - gmx:100302735 1256.51