Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0358 ATGACTCGTGCTTCTCCTCCATCTTCAAGCAAGACATACACTCTAAGAGATGATGAACTCATCCAAAATTTCCTTTACAAAAAGATCCATGCAGAAGTTGTGCCTACCCATCTTACCATTCTTGAATGTGACTTGTATGGTTCAAAGAATCCTTGGGAAATTTGGGAAGCTTTTGAAGGGTCCAGTTATGATGGAAGGGACCTCTATATATTCACTACCTTGAAGAAGAAATCTCTTAACGGCGCACGGTTCCTTCGCATCATTGGTTGCGGTTCTTGGGAAGCTGAAGACACTGGGAAAAAGGTAGTAGTTGAGGGCACAAATCAATGTATTGGATTGAAGAAACGTTTTCGCTTTGAGAAGAGTGACACTGAGCATGATGGTGCGTGGATCATGCATGAATATAGCCTTCACCCATCCTTGCAAACCAATCCACCTATTTAG 444 0.4234 MTRASPPSSSKTYTLRDDELIQNFLYKKIHAEVVPTHLTILECDLYGSKNPWEIWEAFEGSSYDGRDLYIFTTLKKKSLNGARFLRIIGCGSWEAEDTGKKVVVEGTNQCIGLKKRFRFEKSDTEHDGAWIMHEYSLHPSLQTNPPI* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0358 147 Gene3D NAC domain 16 146 IPR036093 GO:0003677|GO:0006355
Lan5g0358 147 ProSiteProfiles NAC domain profile. 7 147 IPR003441 GO:0003677|GO:0006355
Lan5g0358 147 Pfam No apical meristem (NAM) protein 16 137 IPR003441 GO:0003677|GO:0006355
Lan5g0358 147 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 16 139 - -
Lan5g0358 147 SUPERFAMILY NAC domain 16 143 IPR036093 GO:0003677|GO:0006355
Lan5g0358 147 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0358 Lan-Chr5 7164623 7166027 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0358 17 137 NAC Transcription Factor Family AT5G13180 34.959 1.06e-14 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan5g0358 NAM 6.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0358 - - lang:109359846 216.468