Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0349 ATGGGAACCCCACAATCCAATTTGCCACCAGGTTTTAGGTTCCACCCAACTGATGAGGAACTCATTCATCACTATCTCGTGAAGAAGGTAGCCTCCATCCCCTTCCCAGTTTCCATCATTGCTGAGGTTGATATCTATAAGTTGGATCCATGGGATTTACCAGCAAAGGCTGCATTTGGGGAGAAAGAATGGTATTTTTTCAGTCCTAGAGACCGCAAGTACCCTAATGGTGCTAGGCCTAACAGGGCAGCTGCTTCAGGATATTGGAAGGCCACTGGCACAGATAAGACCATAGTGACATCATTGGCAGGAGGAGGAAGAGCCAGAGAGAACATTGGTGTGAAGAAGGCTCTTGTATTTTACGAGGGAAGGCCCCCAAAGGGTGTCAAGACCAATTGGATTATGCATGAATATCGTCTTCTAGACAACAGCAGACCTAATAAGCTCAAAGACACCTCCATGAGGTTGGATGACTGGGTTTTGTGCCGGATTTACAAGAAAGCTAAATACACAGTATCTTCAACAGATACAACAAAAGTGGTAGGTGATCAAGATAATCCTGAAGAAAAACTATTCAAAGATACTGTTTTGCCAATCTCTCATAAAAGTCCAACTCCTCCTCAGAACACACTAATATCTCAAAAATCTGTGTCCTTTTCCAACCTATTGGATGCCATGGACTACTCCATTCTGAGCAGCTTCTTATCTGAGACTGAGAACCATTCCAATAACCCAATAGGCACTATTGGATCAAGCGTGGGATTCAACAGTGGGAATAGCATGTATCAGCAACCTTTTCAAATGGACACCTGCATCAATGGGCACATGTTTCATATGAATCCTTCAGTGCCCAACATGGAAAATATAATAAAGCCCAAGCGCCAACTTTCATCAAACATAGATGAGGACATGCAGTTATATCCTTCAAAGAAATACCTTAGTTCCTATTGCAATTTGCCTAACATTAATGCCCAATATCATCAGAGCTACCTCATGAACCAGTCTTTGTTGAATCAGCATTTACTTTTGGGCCCTCACCCTCTTTTTCAGGGTTAA 1056 0.4271 MGTPQSNLPPGFRFHPTDEELIHHYLVKKVASIPFPVSIIAEVDIYKLDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVTSLAGGGRARENIGVKKALVFYEGRPPKGVKTNWIMHEYRLLDNSRPNKLKDTSMRLDDWVLCRIYKKAKYTVSSTDTTKVVGDQDNPEEKLFKDTVLPISHKSPTPPQNTLISQKSVSFSNLLDAMDYSILSSFLSETENHSNNPIGTIGSSVGFNSGNSMYQQPFQMDTCINGHMFHMNPSVPNMENIIKPKRQLSSNIDEDMQLYPSKKYLSSYCNLPNINAQYHQSYLMNQSLLNQHLLLGPHPLFQG* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0349 351 Gene3D NAC domain 17 172 IPR036093 GO:0003677|GO:0006355
Lan5g0349 351 SUPERFAMILY NAC domain 4 167 IPR036093 GO:0003677|GO:0006355
Lan5g0349 351 Pfam No apical meristem (NAM) protein 9 140 IPR003441 GO:0003677|GO:0006355
Lan5g0349 351 ProSiteProfiles NAC domain profile. 8 167 IPR003441 GO:0003677|GO:0006355
Lan5g0349 351 PANTHER OS01G0104200 PROTEIN 5 263 - -
Lan5g0349 351 PANTHER NAC TRANSCRIPTION FACTOR 56 5 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0349 Lan-Chr5 6632388 6634931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0349 4 351 NAC Transcription Factor Family AT3G04070 51.389 9.12e-104 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan5g0349 NAM 4.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0349 - - gmx:100301906 515.383