Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0334 ATGGAGTTTAGGGTACCCTTCATCCTCTTCTATCTCTCACTCATTCTTTTACTCTTCTTCCCTTTTTCCTCCGCTCAGATGACAGGTTTCTTAAGTTTGGACTGCGGAGGTAATGGGAATTTCATTGATGAAATTGGTCTTCAATGGAATCCTGATGATAAACTTACTTATGGAGAAATAAGCAATATATCAGTTGTCAATGAAACACGGAACCAATACAAAACACTGCGACATTTTCCCGCGGATTCCAGGAAATACTGTTACACACTTGATGTTGTTAGTAGGACAAGGTACCTGCTGAGGGCAACATTCTTGTATGGAAACTTTGATAACAACAATTTTTATCCAAAATTTGACATTTCTGTTGGGGCTACTCATTGGTCTACTATTGTTATATCTGATGCTAACATTATAGAAACGAGAGAGCTTATATTTTTGGCTACAAGTCCTACAATTAGTGTGTGTTTATCAAATGCAACAACTGGGCAGCCATTCATATCTACACTTGAACTCCGGCAATTCAATGGTTCAATTTACTATACTGAATTTGAGCAACATTTTTACCTCAGTGTCTCAGCAAGGATAAATTTTGGTGCAGCTAGCGATGCTCCTATCAGGTATCCCGATGACCCATTTGATAGAATTTGGCAGTCAGATTCTTTTAAGAAAGCAAACTATCTGGTTGATGTTGCTGCTGGGACTCAGAAGATTTCCACCAATGTATCAGTTGATGTTAACAGATTTGAGTTACCACCGGCAAAAGTAATGCAGACAGCTGTAGTTGGTACGAAGGGATCTCTATCTTACCGAGTGGACTTGAATGGTTTTCCTGGTTTTGGTTGGGCAGTCACCTATTTTGCTGAGATTGAAAATTTGGCTCAAGAAGAATCAAGAAAATTCAGGCTGGTACTTCCAGGCCGGCCTGATATCAGCATGCCTGTGGTAAATATTGAAGAAAATGCTCCGGGAAAATATCGCCTTTATGAACCAGGATACACCAATCTATCCTTACCCTTTGTGCTATCCTTTAAATTCAAAAAGACAAATGATTCATCCAAGGGTCCTCTTCTAAATGCCATGGAGATAAATAAGTATCTGGAGAAAAATAGTGGCTCTCCTGATGGAGATGCTATATCTAGTTTACTTTCATACTACCCTTCAGCAGATTGGACAAAAGAAGGGGGCGACCCTTGTCTTCCTGTTCCATGGTCATGGGTCCATTGTAGCTCAGATCCACAGCCAAGAATAGTTTCAATTTTGTTGTCCAATAAAAACTTGACGGGCACTATTCCTTTGGGTATCACCAAATTGACTGGTCTGGTTGAACTTTGGCTTGATGGAAATATGTTGACAGGACCTATACCAGATTTTAGTGGATGCATGGACTTAAAGATCATTCATCTTGAGAAAAATCAGTTGACAGGTCCACTTCCAACCACTTTGCTGAACCTTCCAAATTTGAAGGAACTGTATGTGCAGAATAATATGTTATCTGGAATAATACCGTCTGATCTTCGGAACAAAGATTTGGTTTTGAACTACACTGGAAACTTTAATCTTCATAAAGAAAGCGGAAAAAAGAGCGACAAGTATGTGATCATTATTGGTTCGGTAGTTGGGGCTGCCGTTCTACTTTTGGCTACTGTTATATCATTCTTCACTATCAATAAAGGAAAGAAAAAATATGATCAGAAAGACCACTTTGTTTCTCACCCTTCTCCAAGTATGGTTTCTTCTAAGAATGATGGTCATGCCGAAGCTGCTCACGCCTTCAGTTATTCTGAAATTCAAAATTCTACAAATAATTTCGAGAAAAAGATCGGTTCCGGAGGTTTTGGAGTTGTTTACTATGGGAAATTGGATGATGGAAAAGAGATAGCAGTAAAAGTTCTAACCAGTAATTCCTATCAAGGCAAACGAGAGTTCTCCAATGAGGTGAGTCTTCTTTCAAGAATACATCACAGAAACTTGGTACAGTTTCTTGGGTATTGCCGGGAAGAAGGGAATTGCATGCTTATTTATGAATTCATGCACAATGGAACTCTCAAGGAACATCTTTACGGGCCATTAACGCATGGACAGAGCATTGATTGGATTAAGCGTCTTCAGGTTGCAGAAGATGCTGCCAAAGGAATTGAATATCTTCATACAGGCTGTGTTCCTGCAGTTATCCATAGAGACGTAAAAAGCAGCAACATTCTTCTAGACAGACAGATGAGAGCCAAGGTTTCGGATTTTGGTCTTTCAAAACTCGCTGTTGAAGGAGTCTCTCATGTTTCGAGCATAGTTCGAGGAACAGTCGGATATTTGGATCCTGAGTACTATATTTCCCAACAGCTTACCGACAAGAGTGATGTTTATAGTTTCGGCGTAATTCTTCTCGAACTAATATCTGGCCAAGAAGCAATATCAAATGACAGCTTTGGTACTAATTGCCGAAACATAGTCCAGTGGGCAAAATTACACATTGAGAGTGGGGATATACAAGGTATTATTGATCCTGTCCTACAAGGCAACTTCGACCTGCAGTCGATGTGGAAAATAGCAGAGAAAGCAATGATGTGTATTCAACCTCATGGACACATGCGGCCATCGATTTCGGAAGTTCTGAAGGAGATTCAAGACGCATTAAGTATTGAGAGAGAGTCAGGAAGAAATTCAGATGATTTGTCAAGAAATTCTATTCATTCTTCCACCCACATGGGTTCTATGGATTATGGTGTAGCTGAAAACTTTTTGTCAATTGATGAATCCATTGCACAACCTACTGCAAGATAA 2778 0.3967 MEFRVPFILFYLSLILLLFFPFSSAQMTGFLSLDCGGNGNFIDEIGLQWNPDDKLTYGEISNISVVNETRNQYKTLRHFPADSRKYCYTLDVVSRTRYLLRATFLYGNFDNNNFYPKFDISVGATHWSTIVISDANIIETRELIFLATSPTISVCLSNATTGQPFISTLELRQFNGSIYYTEFEQHFYLSVSARINFGAASDAPIRYPDDPFDRIWQSDSFKKANYLVDVAAGTQKISTNVSVDVNRFELPPAKVMQTAVVGTKGSLSYRVDLNGFPGFGWAVTYFAEIENLAQEESRKFRLVLPGRPDISMPVVNIEENAPGKYRLYEPGYTNLSLPFVLSFKFKKTNDSSKGPLLNAMEINKYLEKNSGSPDGDAISSLLSYYPSADWTKEGGDPCLPVPWSWVHCSSDPQPRIVSILLSNKNLTGTIPLGITKLTGLVELWLDGNMLTGPIPDFSGCMDLKIIHLEKNQLTGPLPTTLLNLPNLKELYVQNNMLSGIIPSDLRNKDLVLNYTGNFNLHKESGKKSDKYVIIIGSVVGAAVLLLATVISFFTINKGKKKYDQKDHFVSHPSPSMVSSKNDGHAEAAHAFSYSEIQNSTNNFEKKIGSGGFGVVYYGKLDDGKEIAVKVLTSNSYQGKREFSNEVSLLSRIHHRNLVQFLGYCREEGNCMLIYEFMHNGTLKEHLYGPLTHGQSIDWIKRLQVAEDAAKGIEYLHTGCVPAVIHRDVKSSNILLDRQMRAKVSDFGLSKLAVEGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNDSFGTNCRNIVQWAKLHIESGDIQGIIDPVLQGNFDLQSMWKIAEKAMMCIQPHGHMRPSISEVLKEIQDALSIERESGRNSDDLSRNSIHSSTHMGSMDYGVAENFLSIDESIAQPTAR* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0334 925 Gene3D Phosphorylase Kinase; domain 1 575 676 - -
Lan5g0334 925 Pfam Malectin-like domain 33 363 IPR024788 -
Lan5g0334 925 SUPERFAMILY Protein kinase-like (PK-like) 588 871 IPR011009 -
Lan5g0334 925 Gene3D Transferase(Phosphotransferase) domain 1 677 899 - -
Lan5g0334 925 SMART serkin_6 601 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0334 925 Gene3D Ribonuclease Inhibitor 377 527 IPR032675 -
Lan5g0334 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 723 735 IPR008271 GO:0004672|GO:0006468
Lan5g0334 925 CDD STKc_IRAK 607 874 - -
Lan5g0334 925 Pfam Protein tyrosine and serine/threonine kinase 603 803 IPR001245 GO:0004672|GO:0006468
Lan5g0334 925 ProSiteProfiles Protein kinase domain profile. 601 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0334 925 PANTHER TYROSINE KINASE DOMAIN PROTEIN 14 925 - -
Lan5g0334 925 PANTHER OS07G0107800 PROTEIN-RELATED 14 925 - -
Lan5g0334 925 ProSitePatterns Protein kinases ATP-binding region signature. 607 629 IPR017441 GO:0005524
Lan5g0334 925 SUPERFAMILY L domain-like 400 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0334 Lan-Chr5 5823326 5830231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0334 20 711 Receptor kinase-like Gene Family AT2G37050 65.808 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lan5g0334 Malectin_like 2.8e-75 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0334 - - gmx:100798007 1502.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0334 5 5823326 5830231 Lan11g1406 11 22465460 22472270 PCT
Lan11g1406 11 22465460 22472270 Lan5g0334 5 5823326 5830231 PCT