Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0303 ATGAAGTTTCCATTTCTCAAGAACACAAATAGTGCAAGAAGAAGGTCCTACACTTCATGGGCTTGGCCATCTTGTCACCAAACCAGGACCCTTTCTTTCAGGGCCAACAACCTAAAAGATGATGCAGCCATGTTCAAAACCATTAACTCAGCTTATTCAGAAGCTGAAAGCTCCAAATCATTCTTCACTGAATCTCATGATGAAGACTCAGCTAGCTTCTCAACATGTTCTGAGGACGAGACAATGATTCGTGGGTTGCGTTCAGATCGGCTTTTCTTTGAGCCAGATGAGACTAGCTCTTTGTTAGAGGCCAAAATAGCTTCTCCTCCATTCAAGGATAGTGTGATTCTTTCCATGGTTTCGAAAGATGCCTACGTTGATTTCAGAGAGTCCATGGAGGAGATGGTGCTGGCTTATGGGGTGAATGATTGGGAGAGTTTGGAAGAGCTTTTGTGTTGGTATTTGAAGGTTAATGGAAGAAGCAATTATGGGTATATTGTGGGTGCTTTTGTTGATTTATTGGTTGGTATTGCACTTGAATCTGCTTCTTCACCTTCTCCTTCTACTACTGCTTATTCTGGTGGTTCTACTTCTTATGTATCGAGTTCTAGTTCTTCTATGTGTTCTTATCGTTGTAGTGCTTTTTGTGCTTCGTGTTTAGAAGGAAAGGTGAAAGTTAATGGTCCAAGTTCATCTTTGTTGTTAGAACAAGTTAAAGAGGAGATTACTCTTGAAGATGATGAAGCTTAA 750 0.4067 MKFPFLKNTNSARRRSYTSWAWPSCHQTRTLSFRANNLKDDAAMFKTINSAYSEAESSKSFFTESHDEDSASFSTCSEDETMIRGLRSDRLFFEPDETSSLLEAKIASPPFKDSVILSMVSKDAYVDFRESMEEMVLAYGVNDWESLEELLCWYLKVNGRSNYGYIVGAFVDLLVGIALESASSPSPSTTAYSGGSTSYVSSSSSSMCSYRCSAFCASCLEGKVKVNGPSSSLLLEQVKEEITLEDDEA* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0303 249 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 212 - -
Lan5g0303 249 Pfam Transcriptional repressor, ovate 121 177 IPR006458 -
Lan5g0303 249 ProSiteProfiles OVATE domain profile. 117 176 IPR006458 -
Lan5g0303 249 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 212 IPR038933 GO:0045892
Lan5g0303 249 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 116 176 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0303 Lan-Chr5 4653197 4654227 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan5g0303 Ovate 8.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0303 - - tcc:18598361 219.55