Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0294 ATGCTAGGGAAAAAGATGGTATCATTTAAGAAACTAGCCAAAAAAGTGAAATCTTCTAGTGGAACTGACCCTAACTCTCACTACCAAGAATGTTTGCTGAAAAGATATGAGGGAGAATCTTCCAACACAACTACCCCAACTGGGTTTTTTGCACTTTATGTAGGAGAAGAGCACCAGAGATATGTGGTTCCAACCAGCTACCTTTCTCACCCTTTATTCAAGATGCTGCTTCAGAAGGCTTATGATGAATTTGGATTTACACAGAGCAGTGGCCTTGTAGTACCATGCAGTGTTTCCACATTTCAGGAGGTGATAAATGCTATCGAATGCAACAAAGCCAACTTTGACTTGTGCAAAATTTTTGAAGAGTTTGTTTAA 378 0.3942 MLGKKMVSFKKLAKKVKSSSGTDPNSHYQECLLKRYEGESSNTTTPTGFFALYVGEEHQRYVVPTSYLSHPLFKMLLQKAYDEFGFTQSSGLVVPCSVSTFQEVINAIECNKANFDLCKIFEEFV* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0294 125 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 125 - -
Lan5g0294 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 125 IPR003676 GO:0009733
Lan5g0294 125 Pfam Auxin responsive protein 20 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0294 Lan-Chr5 4334346 4335086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0294 46 111 Calmodulin-binding Proteins AT5G20810 54.545 1.56e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0294 K14488 - gmx:100782364 189.889