Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0286 ATGGCTGAAGAACATCGATGCCAAGCTCCTGAAGGACACAGACTCTGCGCCAATAACTGTGGCTTCATCGGTAGCCCAACCACCATGAATCTCTGTTCCAAATGCTACAGAGATATCCGTTTAAAGGAACAAGAAGAAGCATCAACCAAATCCACAATCGAAACCGCTCTATCCACCTCCTCCACCTCCTCCACCTCTTCACCGCCGTTGTCCACGTCATCTCCGGCCGTCGTTCTCATCCCTAGTGCATCGATCTCAGCTGCAACCGTATCCAAAGGCGCTGCTTCATCCGGTTTAGTTTCTGCAGCGGTTCAACCGAACCGGTCTGGTTTAGTTTCTGCAGCGGTTCAACCGAACCGGTGCGCCTCGTGCAGGAAACGGGTCGGGTTGACCGGGTTCAAGTGCAGGTGTGGGGTCACGTTCTGTGGGACCCACAGGTACCCGGAGAAACACGAGTGCAGTTTCGATTTCAAGACGGTGGGGAGAGAGGAAATAGCGCGAGCTAATCCGGTGATAAAAGCGGTGAAGCTTGAGAGGATTTGA 543 0.5322 MAEEHRCQAPEGHRLCANNCGFIGSPTTMNLCSKCYRDIRLKEQEEASTKSTIETALSTSSTSSTSSPPLSTSSPAVVLIPSASISAATVSKGAASSGLVSAAVQPNRSGLVSAAVQPNRCASCRKRVGLTGFKCRCGVTFCGTHRYPEKHECSFDFKTVGREEIARANPVIKAVKLERI* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0286 180 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Lan5g0286 180 MobiDBLite consensus disorder prediction 47 72 - -
Lan5g0286 180 Gene3D - 1 74 - -
Lan5g0286 180 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 180 - -
Lan5g0286 180 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 59 - -
Lan5g0286 180 MobiDBLite consensus disorder prediction 50 72 - -
Lan5g0286 180 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Lan5g0286 180 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Lan5g0286 180 ProSiteProfiles Zinc finger AN1-type profile. 115 161 IPR000058 GO:0008270
Lan5g0286 180 SMART AN1_Zf_4 121 158 IPR000058 GO:0008270
Lan5g0286 180 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 180 - -
Lan5g0286 180 Gene3D - 94 176 IPR035896 -
Lan5g0286 180 SUPERFAMILY AN1-like Zinc finger 109 174 IPR035896 -
Lan5g0286 180 Pfam AN1-like Zinc finger 121 157 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0286 Lan-Chr5 4022449 4023267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0286 1 180 C2H2 Transcription Factor Family AT3G52800 54.144 1.58e-53 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0286 - - lang:109347531 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0286 5 4022449 4023267 Lan20g1129 20 14812723 14813787 PCT