Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0284 ATGAAGGTTATCGCTGCTTATTTGTTGGCTGTGCTTGGAGGCAACAACACCCCCTCCACTAAGGACATCAAGAGCATCCTTGCTTCTGTTGGAGCTGAAGCAGATAATGACAAGATTGAACTGCTTTTATCTGAAGTTAAGGGTAAAGATGTAGCAGAACTTATTGCTTCTGGTAGGGAAAAGTTAGCGTCAGTGCCTTCTGGTGGTGGTGCAGTTGCTGTTGCTGCTGCTCCTGGTGGAGGAAGTGGTGGAGCTGCTGCCCCAGCAGCTGCTGAGGCAAAGAAGCCGGAAAAGGTGGAGGAGAAAGAGGAATCTGACGATGATATGGGCTTCAGTCTCTTCGATTAA 348 0.4856 MKVIAAYLLAVLGGNNTPSTKDIKSILASVGAEADNDKIELLLSEVKGKDVAELIASGREKLASVPSGGGAVAVAAAPGGGSGGAAAPAAAEAKKPEKVEEKEESDDDMGFSLFD* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0284 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lan5g0284 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lan5g0284 115 Gene3D - 1 59 IPR038716 -
Lan5g0284 115 MobiDBLite consensus disorder prediction 79 115 - -
Lan5g0284 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 115 - -
Lan5g0284 115 Pfam 60s Acidic ribosomal protein 18 114 - -
Lan5g0284 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0284 Lan-Chr5 3975165 3977617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0284 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 68.696 1.36e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0284 K02943 - qsu:111996733 125.946