Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0283 ATGGGTTCATTCTCTGGAACTTGTGAAATAGTTGAAGTAAAGAGAGAAATAAATACAGGAAAAGCTGCAAGGGTTTACCGGTTTAACTCTAGATTTAGCGCAGCTGAGAAAAATCAGAAACTTCCTGTGCTGAAGCTGGGATACAAGAATAATCCAGATAATGATATAAATAAGTTGTTTGAATCATTTACTCTTAAACCTTCATCAAGGGGTTTGGGTATTCTACAAGATAGTACAAGCCCCAAGATGAAAAGTGCATTAAAAAAACCAATCACAGTGGATGTACCACAGTCCCCACGGGTTGGGACTTGTGAGCCTGCAACTTTGAAGCAGGCATTAAGAGACATGTGTATATCCAAGGCTTCCGAAATGGCTGCTACGAAAAGATTATCAAAGTCAACAGCTGCTTCACCAAGAATATCGGAGGTTGGGAAGATACATGCATTGTACAATTCAGTTGTAGTTGAAGGTAGGCGATCTGGGCCGTCTAACCTTGGGTGCAAAGGGAGTACAATTGAAATATCCATAGTGTCAGAAGAAATCAAGTCACTTTCCTCAGATAAAATATCCCAGACTCATCAAACTGACAAAAGCACATCTTTGGTCCAAGACAACCATTCTTCCACAATTGCAGTTGCATTTACAGAAAATGGTACTGGTACGTCATTGATGCATAGTGATTCGGTATGCTCATCAAGTAAAGTTGGGGAACAATTACAGCCGTTGGACTCTGCTCATGTAGAGAAACAAACATCTGCATCTTCTCCATCTATTTATAACACTGATGGAAGTAAACTTGAGTTGCCTGAAAGGGTTCCTTCCCCTAAAAAATTAGGAAATAAAGCATCTGTCTTAAAGAACGGGCGGAAAGGTAGGTTGCAAATGGTATCTTCCTCATCTTCTTCAGTAAATGGCAATGGCGTGTGCAAACTGTCACACAAACGCAATGCCCCCCATATAGTCAAATCAATCATAAAAAACAAGAGTTTGGATAAGAAAAAATTGAAGCAGGGTTCAGGTTCTGTTTTATGTAACCCTACATCCGATGAAGTAAATTACAAGTCAGTTCCTGGTGCAGCTCGACTGGTTTGCAAGAGATGTTTGTCTTCTATAGAAAATACAAGTAAAGAAAACAACCAAGGTGTTATAGCATTGGGATCTATCAGTCCTGGAGATGGAGTGAACTTAAATAATGTGCATCCTGGCTCAGCATCAACTGGCTGTGATAGCAGCAGAGAAGTTGCTAAAGTGAAAAGGAACACCAGGTTGAAAGAACAACTTCAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTAACAGTGATGACAGCAATATTAGTGGTTCTACTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGATGGGAAGCTATACGACATGCTCAAATACAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTCTGAAGAAACTTGGTTGTGGAGACATTGGAACTGTATATCTTGCTGAACTAATTGGCACAAATTGCTTGTTTGCTATTAAGGTCATGGACAATGACTTTTTGGCTAGAAGAAGGAAGATGCCTAGGGCTCAAACTGAAAGAGAAGTATTAAGGATGCTGGATCATCCTTTTCTTCCTACAATGTATGCACAATTTACATCAGATAATCTTTCATGTCTGGTCATGGAGTATTGTTCAGGAGGAGATCTTCATGTTCTGCGGCAGAAACAACTTGTTAGAAGTTTTTCAGAGCCAGCAGCTAGGTTTTATGTTGCTGAAGTCCTTCTTGCTTTGGAGTATTTGCACATGCTTGGCGTAGTTTACCGCGATTTGAAACCTGAAAACATTCTTGTTCGAGAAGATGGCCACATTATGCTCACAGATTTTGACCTGTCACTAAGGTGTGATGTTAGCCCAACACTTTTTAAATCACCTGATAAGGATCCTGCTAAGATTTTGGGTCCTTGTCCAAAACCAAGTTGCATTGAACCATTCTGCATTGAACCAGCCTGTCAAGTTACATGCTTCAGCCCCATATTCTTACATCCTGGTGCTAGAGCAAGGAAATTAAAAGCTGATCTTGCTGCTCATATCAGATCATTGCCACAGCTCGTGGCTGAGCCGACCGATGCTAGATCAAATTCATTTGTTGGTACTCATGAATACTTAGCTCCAGAGATCATCAAAGGAGAGGGACATGGTGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATATGGTAGAACACCCTTCAAGGGTTCGAATAATGAAGAAACATTAGCCAATGTGGTGTTGCAGAGTCTCAGATTCCCTGATACCCCGTTTGTCAGTTTCCAAGCCAGGGATCTCATAAGAGGATTGCTGTTTAAAGAGCCCAAAAACCGTTTAGGTTCAGAGAAAGGCGCTGCTGAGATTAAACAACACCCATTCTTTGAGGGTCTTAATTGGGCCTTAGTACGCTGTGCTATCCCACCTGAGATTCCAGACTTTTGTGAGTTTGGAGTTTCAGACATGACCTCACTGTCACAGAGCAACGGTAGTAAGTATTTAGAGTGCAAAGTAGGAGAGGAAGTGGAATTTGAGTTGTTCTAA 2613 0.4103 MGSFSGTCEIVEVKREINTGKAARVYRFNSRFSAAEKNQKLPVLKLGYKNNPDNDINKLFESFTLKPSSRGLGILQDSTSPKMKSALKKPITVDVPQSPRVGTCEPATLKQALRDMCISKASEMAATKRLSKSTAASPRISEVGKIHALYNSVVVEGRRSGPSNLGCKGSTIEISIVSEEIKSLSSDKISQTHQTDKSTSLVQDNHSSTIAVAFTENGTGTSLMHSDSVCSSSKVGEQLQPLDSAHVEKQTSASSPSIYNTDGSKLELPERVPSPKKLGNKASVLKNGRKGRLQMVSSSSSSVNGNGVCKLSHKRNAPHIVKSIIKNKSLDKKKLKQGSGSVLCNPTSDEVNYKSVPGAARLVCKRCLSSIENTSKENNQGVIALGSISPGDGVNLNNVHPGSASTGCDSSREVAKVKRNTRLKEQLQFSQSSKSSQGDYSSSTSNSDDSNISGSTCGNRPHMSKDVRWEAIRHAQIQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNDFLARRRKMPRAQTEREVLRMLDHPFLPTMYAQFTSDNLSCLVMEYCSGGDLHVLRQKQLVRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLFKSPDKDPAKILGPCPKPSCIEPFCIEPACQVTCFSPIFLHPGARARKLKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLRFPDTPFVSFQARDLIRGLLFKEPKNRLGSEKGAAEIKQHPFFEGLNWALVRCAIPPEIPDFCEFGVSDMTSLSQSNGSKYLECKVGEEVEFELF* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0283 870 Gene3D Transferase(Phosphotransferase) domain 1 711 835 - -
Lan5g0283 870 MobiDBLite consensus disorder prediction 394 413 - -
Lan5g0283 870 MobiDBLite consensus disorder prediction 420 461 - -
Lan5g0283 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Lan5g0283 870 Pfam Protein kinase domain 715 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0283 870 Pfam Protein kinase domain 488 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0283 870 SUPERFAMILY Protein kinase-like (PK-like) 464 846 IPR011009 -
Lan5g0283 870 Gene3D Phosphorylase Kinase; domain 1 485 566 - -
Lan5g0283 870 MobiDBLite consensus disorder prediction 424 460 - -
Lan5g0283 870 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 870 - -
Lan5g0283 870 Gene3D Transferase(Phosphotransferase) domain 1 567 635 - -
Lan5g0283 870 CDD STKc_phototropin_like 485 836 - -
Lan5g0283 870 MobiDBLite consensus disorder prediction 394 410 - -
Lan5g0283 870 PANTHER FLIPPASE KINASE 1-RELATED 1 870 - -
Lan5g0283 870 MobiDBLite consensus disorder prediction 243 282 - -
Lan5g0283 870 ProSiteProfiles Protein kinase domain profile. 487 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0283 870 SMART serkin_6 487 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0283 870 MobiDBLite consensus disorder prediction 243 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0283 Lan-Chr5 3961911 3968261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0283 1 870 AGC Kinase Gene Family AT2G36350 49.688 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan5g0283 Pkinase 1.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0283 - K08286 gmx:100813470 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0283 5 3961911 3968261 Lan8g1173 8 16318242 16323797 PCT
Lan5g0283 5 3961911 3968261 Lan20g1156 20 15788972 15793325 PCT
Lan8g1173 8 16318242 16323797 Lan5g0283 5 3961911 3968261 PCT
Lan20g1156 20 15788972 15793325 Lan5g0283 5 3961911 3968261 PCT