LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan5g0282	ATGGAGAAACGAAGGGATGGAAGGAAGAAGTTCCATGAGACTCGACATCCAATCTATAAAGGTGTGAGAAAGAGAAACGGGAAGTGGGTTTGCGAGCTACGAGAACCTAACAACAAAACTCGTGTATGGCTTGGAACATTTGCACATCCAGACATGGCAGCCATAGCCTATGATGTTGCAGCTTTGGCTTTCAAAGGAGACACTGCTTCCTTAAATTTCCCACACTCATCTACCTTGTTGCCACGCCTTAACTCAAAGACCTCTTCCATTAGAGCTATTCAATTTGCTGCAATGGAAGAAGCTCAGAAACATTTCTCCAGAGAGTTGAAACCCAAAGAAATAAGTACTGAAAATGCGTCTGAGTTGTCTTTAGAGGTCGGTTTAGAGGGAGATTCTGGAAGCTTCTTTTGGGATGAAGAAGAAGTGTTTAACATGCCAGGGTTGATGAATAGCATGGCAGAAGGGTTGATTATCACACCACCAGCTTTGCAGAGAGGATTCAATTGGGTTGGTGTGGAAAGTTTTGTGGACTTGACTCTCTGGGGAGACTGA	552	0.4402	MEKRRDGRKKFHETRHPIYKGVRKRNGKWVCELREPNNKTRVWLGTFAHPDMAAIAYDVAALAFKGDTASLNFPHSSTLLPRLNSKTSSIRAIQFAAMEEAQKHFSRELKPKEISTENASELSLEVGLEGDSGSFFWDEEEVFNMPGLMNSMAEGLIITPPALQRGFNWVGVESFVDLTLWGD*	184

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lan5g0282	183	CDD	AP2	17	76	IPR001471	GO:0003700\|GO:0006355
Lan5g0282	183	ProSiteProfiles	AP2/ERF domain profile.	18	74	IPR001471	GO:0003700\|GO:0006355
Lan5g0282	183	Pfam	AP2 domain	17	66	IPR001471	GO:0003700\|GO:0006355
Lan5g0282	183	Gene3D	AP2/ERF domain	18	76	IPR036955	GO:0003700\|GO:0006355
Lan5g0282	183	PRINTS	Ethylene responsive element binding protein signature	19	30	IPR001471	GO:0003700\|GO:0006355
Lan5g0282	183	PRINTS	Ethylene responsive element binding protein signature	56	76	IPR001471	GO:0003700\|GO:0006355
Lan5g0282	183	SMART	rav1_2	18	80	IPR001471	GO:0003700\|GO:0006355
Lan5g0282	183	SUPERFAMILY	DNA-binding domain	18	76	IPR016177	GO:0003677
Lan5g0282	183	PANTHER	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	7	181	-	-
Lan5g0282	183	PANTHER	CBF/DREB1 TRANSCRIPTION FACTOR	7	181	-	-

Showing 1 to 10 of 10 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan5g0282	Lan-Chr5	3925827	3926390	Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan5g0282	3	181	AP2-EREBP Transcription Factor Family	AT4G25470	46.524	2.79e-44	144

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2/ERF-ERF	Lan5g0282		AP2	2.7e-10	CL0081

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan5g0282	-		-	aprc:113870892	290.812

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan5g0282	5	3925827	3926390	Lan19g0401	19	5149161	5150269	LSH
	Lan5g0282	5	3925827	3926390	Lan20g1147	20	15501655	15502516	PCT

Showing 1 to 2 of 2 entries