Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0275 ATGGAAATGCCTGGTAGAAGATCCAACTACTCCCTCTTAAGTCAAATTCCCGACGACCAGTTCAGCGCCGGCGCCGCCTCTTCCGGGAATACTGCACCGTCATCTTCCGGTGACGGGAAAACAAACCGATCCAAGTTCGAGTGGGACATAGTCTCCGATCACAGAGTAGCTCAGCAGCAAGCGAACAATCGGATCGGCAATTTGTTCAATACGACCGGATTGCAGAGGCAATCAAGTGGAAGCAGTTTTGGTGAAAGCTCGATCTCCGGCGGTGCTGACTATAACGCTCCGGCGCTGTTCGCAGCGGCGGTTAGCGATGTGGATACATTTGGTGGTGAGGTGAGGAATAGGTTATTGGAGACTCCGGCCCTTGTTGGAGGGTCCTCCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTACCAGTTGCAGCTAGCCCTGGCGCTTCGGCTTTCGCTAGATGCAACTTGTGCTGATGATCCCAATTTTCTTGATTCAGGGCTGGATGAATCCGCCTTGAGGTCTTCGAGTTCGGTGGAGACGGTTTCACATAGATTCTGGGTGCATGGCTGCCTATCATACTCCGACAAAATTCCCGATGGCTTTTACCTAATTCATGGGATAGATTCCTTTGTTTGGACTGTGTGCACTGATTTGCAGGAAAATGGCCGAATTCCAACTATTGATAAACTAAGGTCTGTGGATCCCTGCATCAATTCTTCACTTGAAGTAGTTTTGGTGGACAGACGCAGTGACCCCAGCTTAAGAGAACTTCAAAACAGAGTACATAACATTTCTAGTAGCAGCATAACAACAACAGAGGTTGTAGACCAGCTGTCCAAGCTGGTTTGCAACCATATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTTGTTTCCTGCTGGAGAGATTGCAGTAATGATCTGAAAGATTGCTTAGGATCTGTTGTTGTTCCCATAGGCAGTCTGTCTGTTGGCCTCTGCAGGCATCGTGCTATTTTATTCAAAGTACTAGCTGATGCCATTGATTTACCTTGTCGAATTGCAAAGGGTTGTAAATATTGCAAAAGGGATGATGCTGCATCTTGTCTTGTCCGGTTTGGGCATGTCAATGACAGGGAATATCTTGTTGATTTACTTGAGAAGCCAGGTTACTTATGTGAGCCCGATTCATTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGAGTTAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTCGGACTGTTTGTCTCTTGAGCTCGTCTTTGATAACAGTTCTGCAGGGGCTGTTACTGATGGAGATCCTGGTTTCCCCATTCTGGATCAGTTTGATGGGAAGTACAAGGATAGGATTAATGCCAGGCAATTAACAAATGACAGCAACAGAAGTTCTTACCTACTTCTACATAAACAAGTTTCTCATTCAAACACTCATGATCATGATTCTGAGACAACTTTTGCCAAGGATCCACCGCTTATAAAGCATAAGCGTCCTCCTGTTGGTATAAGAACCCCATTAGCACTAACAAATCCCAATAATGACATTATTGAAGAAAGGTTATTTTTTGAAGGAAGTCAACTTAATCCTATCAAACCTACTCGAGAGATTGCCCTTGACATGGAGGATTTGGATATATCATGGAGTGATCTTGCTTTAAAAGAAAGAATAGGATCAGGTTCTTTTGGAATTGTACATCGTGCTGAGTGGAATGACTCGGAGGTTGCTGTTAAAATTTTGATGGAACAAGATTTTCATGCTGAACGCGTCAATGAATTCCTTAGGGAGGTTGCAATAATGAAACGCTTGCGGCATCCAAACATAGTTTTATTGATGGGGGCAGTCACTCAGCCTCCAAATTTGTCAATTGTTACCGAATATTTATCAAGGGGTAGCTTATACAGGCTGTTGCATAGACCTGGTGCCAAAGAGGCACTGGATGAGAGGCGTAGGCTTTGTATGGCTTATGACGTGGCAAAAGGGATGAATTACCTTCATAAACGTAATCCGCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTGGTGATTTTGGGCTTTCCCGTCTAAAGGCCAATACATTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTCCGTGATGAACCATCAAATGAGAAGTCAGATGTTTACAGTTTTGGTGTAATCTTGTGGGAGCTTGCAACACTGCAACAACCATGGGGCAATTTGAATCCAGCACAGGTCGTGGCAGCTGTTGGCTTTAAGGGAAAAAGGCTTGATATCCCTCGCGATTTGAATCCCCATGTAGCTGCATTAATTGAAGTTTGCTGGGCCAATGAGCCCTGGAAACGCCCTTCTTTTTCTAGTATTATGGATTCTTTGAGGCCGTTGATCAAACCCCCGACACCTCAATCCAGTCATTCAAACATGCCATTACTTAGCTGA 2520 0.4528 MEMPGRRSNYSLLSQIPDDQFSAGAASSGNTAPSSSGDGKTNRSKFEWDIVSDHRVAQQQANNRIGNLFNTTGLQRQSSGSSFGESSISGGADYNAPALFAAAVSDVDTFGGEVRNRLLETPALVGGSSGKSWAQQTEESYQLQLALALRLSLDATCADDPNFLDSGLDESALRSSSSVETVSHRFWVHGCLSYSDKIPDGFYLIHGIDSFVWTVCTDLQENGRIPTIDKLRSVDPCINSSLEVVLVDRRSDPSLRELQNRVHNISSSSITTTEVVDQLSKLVCNHMGGSASVGEDDFVSCWRDCSNDLKDCLGSVVVPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDAASCLVRFGHVNDREYLVDLLEKPGYLCEPDSLLNGPSSISFSSPLRFPRVKPAEPTIDFRSLAKQYFSDCLSLELVFDNSSAGAVTDGDPGFPILDQFDGKYKDRINARQLTNDSNRSSYLLLHKQVSHSNTHDHDSETTFAKDPPLIKHKRPPVGIRTPLALTNPNNDIIEERLFFEGSQLNPIKPTREIALDMEDLDISWSDLALKERIGSGSFGIVHRAEWNDSEVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHRPGAKEALDERRRLCMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVGDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKGKRLDIPRDLNPHVAALIEVCWANEPWKRPSFSSIMDSLRPLIKPPTPQSSHSNMPLLS* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0275 839 MobiDBLite consensus disorder prediction 489 509 - -
Lan5g0275 839 MobiDBLite consensus disorder prediction 20 41 - -
Lan5g0275 839 SUPERFAMILY Protein kinase-like (PK-like) 542 818 IPR011009 -
Lan5g0275 839 CDD STKc_MAP3K-like 571 819 - -
Lan5g0275 839 Gene3D Phosphorylase Kinase; domain 1 558 643 - -
Lan5g0275 839 Pfam Protein tyrosine and serine/threonine kinase 566 819 IPR001245 GO:0004672|GO:0006468
Lan5g0275 839 ProSitePatterns Protein kinases ATP-binding region signature. 571 592 IPR017441 GO:0005524
Lan5g0275 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 686 698 IPR008271 GO:0004672|GO:0006468
Lan5g0275 839 Gene3D Transferase(Phosphotransferase) domain 1 644 832 - -
Lan5g0275 839 PRINTS Tyrosine kinase catalytic domain signature 639 652 IPR001245 GO:0004672|GO:0006468
Lan5g0275 839 PRINTS Tyrosine kinase catalytic domain signature 680 698 IPR001245 GO:0004672|GO:0006468
Lan5g0275 839 PRINTS Tyrosine kinase catalytic domain signature 727 737 IPR001245 GO:0004672|GO:0006468
Lan5g0275 839 PRINTS Tyrosine kinase catalytic domain signature 746 768 IPR001245 GO:0004672|GO:0006468
Lan5g0275 839 PRINTS Tyrosine kinase catalytic domain signature 790 812 IPR001245 GO:0004672|GO:0006468
Lan5g0275 839 SMART serkin_6 565 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0275 839 ProSiteProfiles Protein kinase domain profile. 565 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0275 839 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 121 834 - -
Lan5g0275 839 Pfam Ethylene-responsive protein kinase Le-CTR1 179 387 - -
Lan5g0275 839 MobiDBLite consensus disorder prediction 20 43 - -
Lan5g0275 839 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 121 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0275 Lan-Chr5 3783447 3807486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0275 1 835 MAP Kinase Kinase Kinase AT5G03730 62.097 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lan5g0275 PK_Tyr_Ser-Thr 7.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0275 K14510 - gmx:100800648 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0275 5 3783447 3807486 Lan20g1152 20 15714457 15726387 PCT
Lan20g1152 20 15714457 15726387 Lan5g0275 5 3783447 3807486 PCT