Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0272 ATGCCAATCCTACCATTCCTCCGTTTAGCTTCCCACTTCACAAAACCAAATCGTTCAAACGCATTCAACCTCTTCCCATTACTCTCCTTTTCCACCACCACCGCCGCCTCATCAGAACAGCACCGTTCTCCGCCTCCCATCCGCGTCGCCCTTACCCACTCCTCCGGCCGTGGCGTCTTTGCCACTCGCCCAATCGCCACCGGAGATCTCATCCACACCGCTAAGCCAGCTTTGTGCCACCCTTCTCTCTCCGCCATCAATACCGTCTGTTACTCTTGCCTCAAGAAGGTTCCCAATTCTTGCAACTTTCAATATCAAGGGGTTTCGTTTTGTAGCCAAGATTGCAAGCAACGCTGCAATGAATATTGTGATGTTGAGATGAGAGCAAATTGGACCGCTTTTGATGACTATTGTCGGAATCATGGTTTGAAATATCCATTTCTGGTAAAGCGGTTGGCTTGCATGGTCATATCAGGAGTTAGCAAAAGTGACAGTCTTGACATACTTCAGCCTGCCAATTTGACATCTGATATGATTTTAGAGATGGAGGAGGAGTTTGCGTTACTAAGGAATGCATTCTCAAAGACATCTATTACAGATGAACATATTGCTTTTTTAACCAAGCAATGGTACATCAGCGTTTTGGCGCGAATTCGAATCAATGCATTTCGCATTGAGTTGGTCGGAGGACTATATGAAGATCTTCTATCATCATTAGTTGCATCTGTAGAAGCTGAAGCTGCTGTAGGAAATGCTGTTTATATACTTCCGTCTCTCTACAATCATGATTGTGATCCTAATGCACACATTATTTGGATAGATAATGCTGATGCCAAAATAAAGGCCCTCCGTGACATTGATGAAGGTGAAGAACTCAGAATCTGCTACATTGATGCCAGCATGGATCACAATGCTCGACAAGAAATATTGTTGCAAGGTTTTGGTTTTCAATGCAATTGTAGTAGGTGCTTACATGGTGATTAA 984 0.4411 MPILPFLRLASHFTKPNRSNAFNLFPLLSFSTTTAASSEQHRSPPPIRVALTHSSGRGVFATRPIATGDLIHTAKPALCHPSLSAINTVCYSCLKKVPNSCNFQYQGVSFCSQDCKQRCNEYCDVEMRANWTAFDDYCRNHGLKYPFLVKRLACMVISGVSKSDSLDILQPANLTSDMILEMEEEFALLRNAFSKTSITDEHIAFLTKQWYISVLARIRINAFRIELVGGLYEDLLSSLVASVEAEAAVGNAVYILPSLYNHDCDPNAHIIWIDNADAKIKALRDIDEGEELRICYIDASMDHNARQEILLQGFGFQCNCSRCLHGD* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0272 327 Gene3D - 141 222 - -
Lan5g0272 327 CDD SET_SMYD 248 323 - -
Lan5g0272 327 SMART set_7 45 303 IPR001214 GO:0005515
Lan5g0272 327 SUPERFAMILY SET domain 44 321 IPR046341 -
Lan5g0272 327 Pfam SET domain 56 296 IPR001214 GO:0005515
Lan5g0272 327 Gene3D - 89 140 - -
Lan5g0272 327 ProSiteProfiles SET domain profile. 45 297 IPR001214 GO:0005515
Lan5g0272 327 Gene3D SET domain 58 323 IPR046341 -
Lan5g0272 327 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 51 324 - -
Lan5g0272 327 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD3 51 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0272 Lan-Chr5 3736239 3740913 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan5g0272 SET 3.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0272 - - adu:107475991 465.307