Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0266 ATGGAAAAGTATTTGAAGGATTTTGAATTGGATGAGCATAAGAATCATACCGTTGAAGCTTTGAGTAGATGGAGATTAGCCGTACGATTGGTTAAGAATCCACGGAGAAGGTTTCGTCATGTTGCGGATCTAGTTAAACGTGTTCAAGCTGAGGAGGAGAAGAAGAAAATACAGCATCAACTAAGAAAAATTCGGGTGGCTGTGTATGTTCAAAAGGCAGTAGAACATTTTACTAATGCTGTTGGTCCAGTTGAATTCAAGACATCAGAAAATACGAGAGAAGCCGGGTTTGGTATTGATCCAGATGATATTGCCACACTTATCTCCAGCCATGACTACAAGAACTATACAAACATTGGTGGAGTTGAAGAAATTGCAAATAAACTCTCAGTATCAGTGGAGGAAGGTGTCAATCAAGACAGTATACATAATAGGCAACAGATTTATGGACTCAACCGTTATACAGAGAAACCTTCGAAATCTTTCCTCATGTTTGTTTGGGAAGCACTGCAAGACTTGACACTTATTATTCTCATAGTTTGTGCTATAGTTTCTATAGGTATCGGGATTCCGACCGAAGGATGGCCAAGTGGTGTGTATGATGGTCTGGGAATCATACTTAGTGTATTCTTGGTAGTTGTTGTAACAGCTACCAGTGACTATCAGCAATCACTGCAGTTCAAGGATTTGGACAAAGAGAAGAAAAAGATATTTGTTCATGTTACCAGGAATGGGAAAAGACAGAAGATCTCAATTTATGATCTAATAGTGGGTGATATTGTTCATTTGTCTACTGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCAGGATACTCATTGCTAATTGATGAATCAAGTTTGACTGGTGAGAGCGAACCGGTTGATATCGATGAACGAAGACCTTTTCTTCTTTCAGGAACCAAAGTGCAAGATGGTCAAGGGAAGATGATAGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAGTTAATGGAAACTCTAAATGAGGGAGGAGAGGATGAGACTCCATTGCAGGTGAAATTGCAGGGAGTTGCTACGATCATTGGTAAAATTGGTTTGGCCTTCGCTGTGCTGACATTTTTGGTGTTGACAGTAAGGTTTGTGATTGAAAAGGCAACTCATGGTGACTTTTCCAGTTGGTCTTCAAATGATGCAATGAAGCTGCTGAATTACTTTTCTATTGCTGTAACCATAATAGTTGTTGCAATTCCTGAAGGATTACCACTGGCTGTGACACTCAGTCTTGCTTTTGCTATGAAAAAATTAATGAATGACAGGGCACTTGTGAGGCATCTTTCTGCATGCGAGACGATGGGTTCGGCTACTTGCATTTGCACAGATAAGACAGGAACATTGACCACTAACCATATGGTGGTTAATAAAATTTGGATATGTGATAAGGCGATGGAGATGACCGGTAATGAGAGTGCAGACAAACTGAAAGCAGAGATACCTGAAGAAGTTATAAGTATCCTTTGGCAGGCTATATTTCAAAATACTTCTTCAGAAGTAGTCAAGGATAAAGATGGAAAGAACACAATATTGGGAACACCAACAGAATCAGCATTATTGGAATATGGCTTGCTTTCAGGCGGTGATTTTAACGCAGAGCGTAAAGCCTATAAGATATTAAAGGTTGAGCCTTTCAATTCAGTCCGGAAGAAGATGTCTGTGCTTGTGGGTCTTCCTGATGGTGGGGTCCGGGCTTTCTGCAAAGGTGCATCAGAAATAATATTAAAAATGTGTGACAAAATTATTGATTGTAATGGAAATGCTGTTGATCTTCCTGAAGAGCAGGCACAAAATGTCTCCGATGTTATAAATGAATTTGCCTCTGAAGCATTGAGAACTCTTTGTTTGGCTGTCAAAGATATAAATGAAACCGAAGGAGAAACCAGTATCCCTGATGATGGCTATACCCTGATTGCCATTGTGGGTATCAAGGATCCTGTGCGCCCGGGGGTTAAGGAAGCTGTTGAGACTTGTTTGGCAGCTGGAATAACTGTCCGCATGGTCACTGGTGATAACATAAATACAGCTAAGGCTATAGCTAAGGAATGTGGTATACTTACTGAGGATGGTATAGCCATCGAAGGACCAGAGTTTCGTAACTTGTCTCCAGAGCAACTGAAGGAAATTGTACCACGAATTCAGGTAATGGCACGATCCTTACCGCTTGACAAGCATACCTTAGTAACCCATTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGGCAGACATTGGGCTTGCCATGGGCATAGCTGGAACCGAGGTAGCCAAAGAAAATGCCGATGTCATTATACTGGATGATAACTTCAGCACTATTGTCAATGTAGCCAAATGGGGACGGGCAATATACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTCAATGTTGTTGCTTTGGTTATTAACTTTGTTTCTGCATGCATCATTGGATCTGCTCCACTCACAGCTGTTCAGTTGCTTTGGGTCAACTTGATTATGGACACTCTTGGTGCATTGGCTCTGGCCACTGAGCCTCCAAATGATGGACTTATGAAAAGAACCCCAGTTGGAAGGAAAACAAGTTTTATCACCAAACCCATGTGGAGGAATATCTTTGGTCAAAGTTTATATCAACTAATTGTCCTTGGGCTTCTCACTTTTGATGGAAAAAAGCTTCTGAGAATTACTGGTTCGGATGCAACTAAAGTACTCAACACTATAATATTCAACTCCTTTGTATTTTGCCAGGTGTTCAACGAGATAAACAGCCGAGAAATCGAGAAGATAAACATATTCAAAGGAATGTTTGACAGCAAGGTATTTTTCTCAGTAATTTTCTCCACAGTGGCATTTCAAGTAGTCATAGTTGAGTTCCTCGGAACCTTTGCAAGCACGGTACCTCTAAACTGGCAAATGTGGTTACTAAGTGTGTTGATCGGAGCAGTCAGCATGCCTATAGCTGTTATACTCAAATGCATTCCGGTTGGAAAAGATACTGTGAAGCAGCACCATGATGGTTATGAGGCACTGCCCTCTGGTCCTGAGATGGCATAA 3114 0.4098 MEKYLKDFELDEHKNHTVEALSRWRLAVRLVKNPRRRFRHVADLVKRVQAEEEKKKIQHQLRKIRVAVYVQKAVEHFTNAVGPVEFKTSENTREAGFGIDPDDIATLISSHDYKNYTNIGGVEEIANKLSVSVEEGVNQDSIHNRQQIYGLNRYTEKPSKSFLMFVWEALQDLTLIILIVCAIVSIGIGIPTEGWPSGVYDGLGIILSVFLVVVVTATSDYQQSLQFKDLDKEKKKIFVHVTRNGKRQKISIYDLIVGDIVHLSTGDQVPADGIFISGYSLLIDESSLTGESEPVDIDERRPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLMETLNEGGEDETPLQVKLQGVATIIGKIGLAFAVLTFLVLTVRFVIEKATHGDFSSWSSNDAMKLLNYFSIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMNDRALVRHLSACETMGSATCICTDKTGTLTTNHMVVNKIWICDKAMEMTGNESADKLKAEIPEEVISILWQAIFQNTSSEVVKDKDGKNTILGTPTESALLEYGLLSGGDFNAERKAYKILKVEPFNSVRKKMSVLVGLPDGGVRAFCKGASEIILKMCDKIIDCNGNAVDLPEEQAQNVSDVINEFASEALRTLCLAVKDINETEGETSIPDDGYTLIAIVGIKDPVRPGVKEAVETCLAAGITVRMVTGDNINTAKAIAKECGILTEDGIAIEGPEFRNLSPEQLKEIVPRIQVMARSLPLDKHTLVTHLRNMFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIILDDNFSTIVNVAKWGRAIYINIQKFVQFQLTVNVVALVINFVSACIIGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMKRTPVGRKTSFITKPMWRNIFGQSLYQLIVLGLLTFDGKKLLRITGSDATKVLNTIIFNSFVFCQVFNEINSREIEKINIFKGMFDSKVFFSVIFSTVAFQVVIVEFLGTFASTVPLNWQMWLLSVLIGAVSMPIAVILKCIPVGKDTVKQHHDGYEALPSGPEMA* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0266 1037 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 205 375 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan5g0266 1037 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 390 517 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan5g0266 1037 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 719 840 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan5g0266 1037 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 547 699 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan5g0266 1037 Pfam E1-E2 ATPase 238 431 - -
Lan5g0266 1037 Gene3D - 168 1013 - -
Lan5g0266 1037 Gene3D - 450 799 IPR023214 -
Lan5g0266 1037 PANTHER CALCIUM-TRANSPORTING ATPASE 4 1022 - -
Lan5g0266 1037 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 110 1015 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lan5g0266 1037 Gene3D - 463 658 IPR023299 GO:0000166
Lan5g0266 1037 SMART Cation_ATPase_N_a_2 115 190 IPR004014 -
Lan5g0266 1037 SUPERFAMILY Calcium ATPase, transmembrane domain M 120 1014 IPR023298 -
Lan5g0266 1037 SUPERFAMILY Calcium ATPase, transduction domain A 238 334 IPR008250 -
Lan5g0266 1037 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Lan5g0266 1037 PRINTS H+-transporting ATPase (proton pump) signature 611 629 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan5g0266 1037 PRINTS H+-transporting ATPase (proton pump) signature 754 770 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan5g0266 1037 PRINTS H+-transporting ATPase (proton pump) signature 786 811 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan5g0266 1037 SUPERFAMILY HAD-like 452 859 IPR036412 -
Lan5g0266 1037 Pfam Cation transport ATPase (P-type) 509 593 - -
Lan5g0266 1037 Gene3D - 136 336 - -
Lan5g0266 1037 CDD P-type_ATPase_Ca_PMCA-like 144 887 - -
Lan5g0266 1037 PANTHER CATION TRANSPORTING ATPASE 4 1022 - -
Lan5g0266 1037 Pfam Cation transporter/ATPase, N-terminus 120 185 IPR004014 -
Lan5g0266 1037 Gene3D - 17 79 - -
Lan5g0266 1037 SFLD p-type atpase 435 807 IPR044492 -
Lan5g0266 1037 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Lan5g0266 1037 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Lan5g0266 1037 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Lan5g0266 1037 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Lan5g0266 1037 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Lan5g0266 1037 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Lan5g0266 1037 Coils Coil 47 67 - -
Lan5g0266 1037 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 48 IPR024750 GO:0005516
Lan5g0266 1037 SFLD Haloacid Dehalogenase 435 807 - -
Lan5g0266 1037 Pfam Cation transporting ATPase, C-terminus 839 1012 IPR006068 -
Lan5g0266 1037 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 663 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0266 Lan-Chr5 3609932 3618176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0266 63 1034 Primary Pumps ATPases AT3G57330 71.708 0.0 1455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0266 K01537 - gmx:100785768 1664.82