Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0263 ATGGCGAAACGGAAGAACTGGTTTGGATGGGTGAAGAGGTTATTCACTTCTGAGTCAAATGACAAAAAATGGCGATGGAGTCTTGGAAGGCTTAAGCAGAAACCAAATCCAACTATTACAGCACCAAACAGGACATTAATTGAAGCAAGTGCTGAGCAAAGAAAGCATGCATTGACTGTGGCAATTGCAACAGCAGCTGCAGCAGAGGCTGCAATTGCTGCTGCTCATGCTGCTGCTGAGGTTGTGAAACTCACAGGTGCTTCTCATTCTTATTCATATCTATGCAACGGAGACCGAAGTTTCGCAGCCATCAAGATTCAGAGCGCATACCGCGCACATCTTGCTAGGAAAGCATTAAGAGCATTGAAGGGTGTTATAAGACTGCAAGCTATCATTCGCGGCCAAGTTGAGAGACGTCGAGTGTCCGGATCTTCGAAGAATTTTCCCTCCAATGCAAGAAATCAGGTAGATATCGAGGAAAGAAGCAGTCATACAGAGGAGGAAAGGTACAAAATTGACCAGATCAAGCAGTTTACAGAGCAAAATAAGTTAGAAGAGAAAGAACTAGAGCCTGGAAACTATAGTCAAAGAACTTGGGATTGCAGCTTGCACTCAAGAAAAGAAATTGAATCCATATGGTTGAGAAAGCAAGAAGCCTTTGTCAAAAGAGAGCGTATGAGACAGTACTCTTTTTCACAAAGGGAGAGACAAAGTCCCCAAGTAATGAAAGAATCTGTGCACAACAAGGAATTTGGAAGAGAGTATTGCCCTACTCTAGGAGAGTGGTTACTTAAAGAACCATGTGATTTGGATGTGCTTTATAAACAAGCTCTTCCTTCAAACCTGATTACAATGAAAAAAGAGTTGCAAGAAGAAGGAATAAGTCCACAAATTTCAACCCCAAGGAAATCATTTTCTCATATAAAAAGTTCAGCTGTGGATGAGATTTCCGGGCCGAATTCTCCAGTTTTTCCTACATACATGGCTGTGACAAAATCCAGCAAAGCAAAGGCAAGGTCTATGAGCACACCAAGGCAAAGAACAGAATTTTTGGGTGTATGCTCCAATCAGAATGATGGCATTTACTTTTGCTCTTCTTATTATGGTGCAACTAGTACTACTAATGGAAACAGTGAAGTTTCTCCTAAGATATGCAAGAGTGCAAAAAAACCAGTGATATCATTAGAAGATGTAAAATCTGGTTCGATGTATGAATTATAG 1221 0.4103 MAKRKNWFGWVKRLFTSESNDKKWRWSLGRLKQKPNPTITAPNRTLIEASAEQRKHALTVAIATAAAAEAAIAAAHAAAEVVKLTGASHSYSYLCNGDRSFAAIKIQSAYRAHLARKALRALKGVIRLQAIIRGQVERRRVSGSSKNFPSNARNQVDIEERSSHTEEERYKIDQIKQFTEQNKLEEKELEPGNYSQRTWDCSLHSRKEIESIWLRKQEAFVKRERMRQYSFSQRERQSPQVMKESVHNKEFGREYCPTLGEWLLKEPCDLDVLYKQALPSNLITMKKELQEEGISPQISTPRKSFSHIKSSAVDEISGPNSPVFPTYMAVTKSSKAKARSMSTPRQRTEFLGVCSNQNDGIYFCSSYYGATSTTNGNSEVSPKICKSAKKPVISLEDVKSGSMYEL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0263 406 SMART iq_5 98 120 IPR000048 GO:0005515
Lan5g0263 406 SMART iq_5 121 142 IPR000048 GO:0005515
Lan5g0263 406 PANTHER IQ-DOMAIN 5-RELATED 1 377 - -
Lan5g0263 406 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Lan5g0263 406 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Lan5g0263 406 MobiDBLite consensus disorder prediction 142 167 - -
Lan5g0263 406 Gene3D - 99 146 - -
Lan5g0263 406 MobiDBLite consensus disorder prediction 142 156 - -
Lan5g0263 406 Pfam Protein of unknown function (DUF4005) 300 349 IPR025064 -
Lan5g0263 406 Pfam IQ calmodulin-binding motif 102 120 IPR000048 GO:0005515
Lan5g0263 406 PANTHER IQ-DOMAIN 12 1 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0263 Lan-Chr5 3556722 3560262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0263 1 376 IQD Protein Family AT5G03960 39.547 1.98e-59 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0263 - - lang:109347509 770.385