Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0239 ATGGAACCTGAATCTGGAGCTTCAGCTTCTCGTAATCCCTCTCCGTTGTCATGGGTAAACCTCTCGAGGAGTTTATTATTAGCATATCAAAGCTTTGGTGTGGTATATGGAGATCTAAGCACATCTCCTCTCTATGTTTATACAAGCACATTTAAAGGGAAGTTGCGAAACCACCATGACGAAGAAATTATTTTTGGGGCATTTTCATTGATTTTCTGGACCCTTACGTTAATGCCCTTGCTTAAATATGTATTCATTCTATTGAGTGCTGATGATAATGGCGAAGGTGGGACATTTGCTCTATATTCTCTGCTCTGTAGACATGCCAAGTTTAATTTGCTCCCCAGTCAACAAGCAGCCGATGAAGAACTGTCATCCTACAAATATGGTCCGTCATCACAAGCAGTTGCCTCATCTCCACTGAAAAGGTTTCTGGAGAAGCATAAAAGGTTAAGAACGGCCCTGCTTGTTGTGGTATTGTTTGGTGCTTGCATGGTAATAGGTGATGGTGTTCTTACTCCTGCAATTTCGGTTCTAGCATCATTATCTGGTCTAAAAGATACAGAAGCGAAATTGACTAACGGTGAACTTGTCCTTCTAGCCTGTGCCATATTGGTTGGCCTGTTTGCACTCCAACATTATGGCACACAAAAAGTTGCATTTGTGTTTGCACCAATTGTGATCATTTGGCTGGCATCCATTTTTTCTGTTGGACTCTATAATATCATATATTGGAATCCAAAAATAATTTTTGCTTTATCCCCACACTATATCGTCAAGTTCTTTATCAAGAGTGGTAAAGAAGGTTGGGTTTCTCTTGGAGGGATCCTTCTCTGTATTACTGGCACTGAAGCTATGTTTGCGGATCTAGGTCATTTCACTGCCTTGTCAATACGGCTTGCATTTACCATTGTTGTATACCCTTGTTTGGTAGTACAGTATATGGGCCAAGCAGCTTTCTTGTCCAAAAATCCCAACTCCGTTCATAATAGTTTTTATGACTCAATACCTGGAGCTATATTTTGGCCTGTCTTTGTTATTGCCACCCTTGCAGCTATTGTTGGGAGTCAAGCTGCTATTACTGCCACTTTTTCCATCATCAAGCAGTGTCATGCACTTGGTTGCTTTCCACGAGTCAAAGTTGTACACACCTCGAAACATATGTTCGGGCAGATCTACATCCCAGAAATAAACTGGATACTTATGATCCTGACTCTTGCTGTAACCATTGGATTTCAAGATACAACCTTAATTGGAAATGCTTATGGGCTTGCTTGTATAACAGTAATGTTTGTGACTACATTTTTGATGGCGCTAGTCATAATCGTTGTCTGGCAGAAAAGCATCCTGATTGCGACAGTATTCCTTTTACTCTTTTGGGTGATAGAGGGCGCATATCTATCAGCAGCATTCATAAAAGTGCATCAAGGAGGATGGGTTCCTCTTGTCTTATCCTTTTTCTTCATGGTTATCATGTATGTATGGCATTACTGGACTCGTAGAAAGTACAACTTTGATCTACGCAACAAAGTTTCATTGAAATGGTTACTAGGTTTGGGCCCTAGCCTTGGTATTGTCCGTGTCCCAGGGATAGGTCTCATCTACTCTGAACTTACAACAGGAGTACCTGCAATATTTTCCCACTTCGTAACTAACCTCCCTGCATTTCACAAGGTGATGATTTTTGTTTGTATAAAATCAGTTCCTGTTCCACATGTCCCACCCGAAGAACGTTTCCTGATTGGGCGAGTTTGTCCCAGACAATATCGTATGTATAGGTGCATTGTAAGATATGGGTACAAGGATATTCAAAGGGATGATGGGGAATTTGAGAACCAACTCATACAGAGTTTAGCAGAATTTATTCAGATGGAAGCAGTGGAACAACCACAATTGTCAAGTTTTGAAACTTTACATGATGGGAGGATGGCTGTTATAAGTACTAGAAGCTTAGAATCAACTTCAAGTTTAATAGTGTCCGAGCACGAAGATTTTGATTTGGATGACAGCATCCCTAGCAGCAAATCTACAACCCTGCGACATTTGCAATCCACTTACGATGATGACAACACACAAGTAAGGAGGCGTCGAGTAAGATTTCAGCTACCTAATAATCCTGGGTTGAATCAAGCTGCTAGGGAAGAGCTTTTAGATCTAATTCAAGCTAAGGAGGCTGGTGTTGCATATATAATGGGGCACTCTTATGTGAAGGCAAGGAAGTCATCTTCATTCTTGAAGAAGTTCATCATCGATATGGGTTACTCGTTTCTTCGGAAGAACTGCAGGAGTCCAGCTGTGTCTCTTAACATTCCACACATCAGTCTTATTGAAGTTGGAATGATATATTATGTCTAG 2355 0.4085 MEPESGASASRNPSPLSWVNLSRSLLLAYQSFGVVYGDLSTSPLYVYTSTFKGKLRNHHDEEIIFGAFSLIFWTLTLMPLLKYVFILLSADDNGEGGTFALYSLLCRHAKFNLLPSQQAADEELSSYKYGPSSQAVASSPLKRFLEKHKRLRTALLVVVLFGACMVIGDGVLTPAISVLASLSGLKDTEAKLTNGELVLLACAILVGLFALQHYGTQKVAFVFAPIVIIWLASIFSVGLYNIIYWNPKIIFALSPHYIVKFFIKSGKEGWVSLGGILLCITGTEAMFADLGHFTALSIRLAFTIVVYPCLVVQYMGQAAFLSKNPNSVHNSFYDSIPGAIFWPVFVIATLAAIVGSQAAITATFSIIKQCHALGCFPRVKVVHTSKHMFGQIYIPEINWILMILTLAVTIGFQDTTLIGNAYGLACITVMFVTTFLMALVIIVVWQKSILIATVFLLLFWVIEGAYLSAAFIKVHQGGWVPLVLSFFFMVIMYVWHYWTRRKYNFDLRNKVSLKWLLGLGPSLGIVRVPGIGLIYSELTTGVPAIFSHFVTNLPAFHKVMIFVCIKSVPVPHVPPEERFLIGRVCPRQYRMYRCIVRYGYKDIQRDDGEFENQLIQSLAEFIQMEAVEQPQLSSFETLHDGRMAVISTRSLESTSSLIVSEHEDFDLDDSIPSSKSTTLRHLQSTYDDDNTQVRRRRVRFQLPNNPGLNQAAREELLDLIQAKEAGVAYIMGHSYVKARKSSSFLKKFIIDMGYSFLRKNCRSPAVSLNIPHISLIEVGMIYYV* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0239 784 Pfam K+ potassium transporter 29 602 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lan5g0239 784 PANTHER POTASSIUM TRANSPORTER 4 21 784 - -
Lan5g0239 784 TIGRFAM kup: potassium uptake protein 27 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lan5g0239 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 21 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0239 Lan-Chr5 2961451 2968616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0239 1 784 Inorganic Solute Cotransporters AT3G02050 75.792 0.0 1190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0239 K03549 - gmx:100776888 1355.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0239 5 2961451 2968616 Lan5g0239 5 2961451 2968616 ECH