Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0223 ATGGATTTGACTTCAGAGAAGAAGGAATTAGAGATCAACAACAACAACTCTGATAATAGCATTGATCAATTGTCACTTGATGCTGCTAACAAAGAAGCCGAAGAACGACAAGCTCGTGATCTCAAAGCCGGTCTTCACCCCCTTAAGCACAAGTTTGTACTTTGGTACACACGGCGCACACCTGGAGTACGAAGTCAAGCATCATATGAGGACAACATAAAGAAAATTGTTGATTTCAGTACGGTTGAAGGATTTTGGGTCTGCTATTGTCATCTTGCTCGTCCTTCTTCTCTGCCTAGTCCAACAGATTTGCATCTTTTTAAGGATGGAATCCGTCCTTTATGGGAGGACTCTGCTAACTGCAATGGTGGTAAATGGATTATACGATTCAAAAAGGTTGTCTCAGGTCGTTTCTGGGAAGACCTGGTTCTTGCCTTAGTGGGTGACCAATTGGATTATGGAGATAACATATGTGGTGCAGTACTCAGCATTCGTTTCAGTGAGGATATATTGAGTGTCTGGAACCGTAATGCATCTGATCATCAGGCTGTAATGGGTCTGAGAGATTCGATTAAACGTCACTTAAAGCTTCCTCATAGCTACGTGATGGAGTACAAGCCCCATGATGCCTCTCTGCGAGACAAGTCATCTTACAGGAACACTTGGTTGAGAGGCTGA 678 0.4336 MDLTSEKKELEINNNNSDNSIDQLSLDAANKEAEERQARDLKAGLHPLKHKFVLWYTRRTPGVRSQASYEDNIKKIVDFSTVEGFWVCYCHLARPSSLPSPTDLHLFKDGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFSEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHSYVMEYKPHDASLRDKSSYRNTWLRG* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0223 225 Gene3D RNA Cap, Translation Initiation Factor Eif4e 21 218 IPR023398 -
Lan5g0223 225 PANTHER BNAA10G16710D PROTEIN 31 225 - -
Lan5g0223 225 Coils Coil 7 41 - -
Lan5g0223 225 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 31 225 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lan5g0223 225 SUPERFAMILY eIF4e-like 37 221 IPR023398 -
Lan5g0223 225 Pfam Eukaryotic initiation factor 4E 47 205 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lan5g0223 225 MobiDBLite consensus disorder prediction 1 22 - -
Lan5g0223 225 ProSitePatterns Eukaryotic initiation factor 4E signature. 103 126 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0223 Lan-Chr5 2776643 2781366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0223 6 225 Eukaryotic Initiation Factors Gene Family AT5G18110 76.818 1.16e-125 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0223 K03259 - gmx:100499744 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0223 5 2776643 2781366 Lan20g1469 20 21390581 21394330 LSH