Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0211 ATGAGTTCATATCAGTTTAACAATGTTGGTTATGGTTCCTATGCAAACCTTAGTAGAGCCCCTGTTCGTTCTTCTTGTCTTTTGGTTCCCCAACAACCTCTTTTGACAAACCCTTTTGAGGTCATGGGTTTATCACAAGAGGTTGAACTTAGGGATCATGTTGAAGCTAGGAATGGTTCTGGTTTAGGGAAAACTAAGCTTTGTGCTAGAGGACATTGGAGGCCATCTGAGGATGCAAAACTTAAAGAGCTTGTTGCTCAATTTGGTCCTCAAAACTGGAACTCCATTGCACAACATTTTCATGCAAGATCAGGTAATCAACAACCTATTTTATATTTTTCGGTATAA 348 0.3937 MSSYQFNNVGYGSYANLSRAPVRSSCLLVPQQPLLTNPFEVMGLSQEVELRDHVEARNGSGLGKTKLCARGHWRPSEDAKLKELVAQFGPQNWNSIAQHFHARSGNQQPILYFSV* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0211 115 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 107 IPR017930 -
Lan5g0211 115 PANTHER MYB PROTEIN-RELATED 51 105 - -
Lan5g0211 115 SUPERFAMILY Homeodomain-like 69 107 IPR009057 -
Lan5g0211 115 CDD SANT 73 107 IPR001005 -
Lan5g0211 115 Pfam Myb-like DNA-binding domain 70 107 IPR001005 -
Lan5g0211 115 ProSiteProfiles Myb-like domain profile. 70 107 IPR001005 -
Lan5g0211 115 PANTHER OS08G0435700 PROTEIN 51 105 - -
Lan5g0211 115 Gene3D - 70 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0211 Lan-Chr5 2590290 2590645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0211 54 114 MYB Transcription Factor Family AT5G17800 59.016 2.72e-19 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan5g0211 Myb_DNA-binding 1.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0211 K09422 - lang:109346936 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0211 5 2590290 2590645 Lan5g0211 5 2590290 2590645 ECH