Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0210 ATGGGAAGCAGAAAGGAAGAAGAGAAGAACGAGAAAATTATCAGGGGTCTCATGAAGCTTCCACCCAATCGAAGATGTATAAACTGTAATAGTATGGGACAGCATTATGTTTGTACAACTTTTTGGACCTTTGTTTGTGTGACATGCAGTGGAATACATCGTGAGTTTACTCATCGTGTGAAGTCTGTGTCTATGGCAAAGTTCACTTCACAAGAAGTTGATGCTCTTCAAAATGGTGGTAACCAGCGTGCAAGGGAAATATATTTGAATAGTTGGGACTTCCAAAGGCAGCGGTTGCCAGATAACAGTAATGTTGATAAAATAAGGGAGTTCATAAGAAATGTATATGTGGATAGAAGATATACTGGAGCAAAGTCTTCTGAAAAGCCTCCAAGAGATCCACAGAGCCCTAGAATCCAAGAAGACGACACAAGGCGTGCTAGTTCTTATCATTCATATTCTCAAAGTCCTCCGTATGATAATCAATATGAGGATCGGCGGTATGGAAAACAAGCGTTTGCACTGACCAGGAAACCAGGTTCTGATAAAGTTCGCTATGAAGGGAAGATGTCTAGTATCATCTATAGCCCCGGTCGATTTAGTGAACATGCATTTGATGAAAGATTTGCGAATGAGGGATCTGCTCGGAGAATTTCTGACTTTTCTGTTTCTAGTGCTGGCGACCAATTCAAATCTGCTGTTCAGTCTCCTATGTTTCATAAGGACATTGGGTTTAGCAGTCCATCTTATCAGCATTCTGGTTCCAATTCAAGTGAGGATGCATGGTCTCAAGCAAGGAGTACTGTCCTGGAAACTAATGCCAAGAGAGGTGCAGATGAAATTCATTGTCCACAGAGAACTACATCATTACAATCAACAGACACCAACTTTTCATCCTTAAGATCTCACAATTCTGGTGGTGTAGTTGATTTTTTCTCTGAACCTGTCCAAGCCTCAGGATACCTTCAGAATAAAGTAGCTGGTGCTCCTCATCCATCTATTCCTATAAGATCTGTTAGTGCGGATCTTTCCAAGTCGCCACTGGCATCTGAACTGTTTCCTTCATCAACTTCATCTGTTAATCTTTTCCCGTTATCAACAACACCATCTGTGGATCTGTTTGAATCATCTGTTTTGTCTGCAGCTCCATCTTTCAATGAGAATCAACCTACACGAACATCCCAACCCCTATCTGTTGACTTTTTTGCAGAACTTGGTCAGCAACCATCTACTGAAATCTCAGATGCAACATCTCATGTTTCATTGGTGGATCTGTTTCAATCCTCTGTTTTGACGGAAGCTCCATCTTTTAATCAGAATCAACCTAGACAAACATTCCAACCCTCATCTATTGACTTCTTTGCAGCTAATTCTCAGCAGCCGTCTGCTACAAACTCAATAGCTCCACCTCAAGCTCCATCTCAGGCTCCATCAGTGAATCTGTATCAATCATCTGTTTTGTCTGCAGCTCCACTTTTTAAGGAGAAACAACCTACCCAAACATCTCAAACGCAACCTATTGACTTCTTTTCAGATCTTGCTCTGCAGCCTTTTACAGCAACCTCAGATGAGAAGTCAGTGAATTTTTCTGTCCCTAAAAATGAAGGATGGGCTGCGTTTGATATGCCTCAGAGCATATCATCTACTGCACAAGTGGGAATTCCTGTTGCAGCACTGTCTAGTGCGGGGTCTTTGCAAGAAAGATTTGATCCATTTTCAAACTTCAATGCGAACATGCAATTGCCATCTGTTGAGATTTCTAGTGTTAGTGCTCCACCTTCTTCAGTTACATCTAACTTATGGCATGATGGTTTGTGGAGTGGAGAAGGACAGGCTCCTAATATTGCAACAAACACTCAACCATGGAATGCATTTGAAAGTTCTGGTACCCATCTTCCTGTGGATGCCTTTAGCAAAGGATTACAACTGCACACATTTCCTTCAGCTGATAATCAATTTTTGGGTTCAAGAGCTTCTGAGTTTGGTGGATCCAATAAAGGTGGCATGCAAGTGATTGCCTCTGTTGGTGGATTTGATAATCATGACATCCCATCACATACCAGTGCTTCACCAAACCTGCCACCCACTCCTCCTCAAATGGGAGATATGCAATCTAGTGGAATCAGTTCTAAGTCAACAAATCCATTTGATTATCCCTATGATTTTGATGTAGAGCACAGCAATATGTTCTTTGATATGAGCTCTTTGCAAGCTGCTCTGCCGGATGCCCTATTGCCTGCCACCTTCAGTGGTGGTATAGCTGAACCATGGCACCCTCAAAGTATGGTGATATCATATATCTCCTCGGCTGGGCAAGGTGGTTTGTCCTTCATCGCTGCACAACCACTAAGTTCTCAAATTCAGAATGTTCAGACACAGGAACCAGTTGCTTCTTTTATGGGAAATCCTTTTGCATAG 2418 0.421 MGSRKEEEKNEKIIRGLMKLPPNRRCINCNSMGQHYVCTTFWTFVCVTCSGIHREFTHRVKSVSMAKFTSQEVDALQNGGNQRAREIYLNSWDFQRQRLPDNSNVDKIREFIRNVYVDRRYTGAKSSEKPPRDPQSPRIQEDDTRRASSYHSYSQSPPYDNQYEDRRYGKQAFALTRKPGSDKVRYEGKMSSIIYSPGRFSEHAFDERFANEGSARRISDFSVSSAGDQFKSAVQSPMFHKDIGFSSPSYQHSGSNSSEDAWSQARSTVLETNAKRGADEIHCPQRTTSLQSTDTNFSSLRSHNSGGVVDFFSEPVQASGYLQNKVAGAPHPSIPIRSVSADLSKSPLASELFPSSTSSVNLFPLSTTPSVDLFESSVLSAAPSFNENQPTRTSQPLSVDFFAELGQQPSTEISDATSHVSLVDLFQSSVLTEAPSFNQNQPRQTFQPSSIDFFAANSQQPSATNSIAPPQAPSQAPSVNLYQSSVLSAAPLFKEKQPTQTSQTQPIDFFSDLALQPFTATSDEKSVNFSVPKNEGWAAFDMPQSISSTAQVGIPVAALSSAGSLQERFDPFSNFNANMQLPSVEISSVSAPPSSVTSNLWHDGLWSGEGQAPNIATNTQPWNAFESSGTHLPVDAFSKGLQLHTFPSADNQFLGSRASEFGGSNKGGMQVIASVGGFDNHDIPSHTSASPNLPPTPPQMGDMQSSGISSKSTNPFDYPYDFDVEHSNMFFDMSSLQAALPDALLPATFSGGIAEPWHPQSMVISYISSAGQGGLSFIAAQPLSSQIQNVQTQEPVASFMGNPFA* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0210 805 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Lan5g0210 805 MobiDBLite consensus disorder prediction 122 164 - -
Lan5g0210 805 MobiDBLite consensus disorder prediction 122 148 - -
Lan5g0210 805 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Lan5g0210 805 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Lan5g0210 805 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Lan5g0210 805 PANTHER ARFGAP/RECO-RELATED 1 418 IPR044820 GO:0005096
Lan5g0210 805 PANTHER ARFGAP/RECO-RELATED 437 805 IPR044820 GO:0005096
Lan5g0210 805 SUPERFAMILY ArfGap/RecO-like zinc finger 10 122 IPR037278 -
Lan5g0210 805 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Lan5g0210 805 CDD ArfGap_AGFG 11 121 - -
Lan5g0210 805 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Lan5g0210 805 MobiDBLite consensus disorder prediction 685 709 - -
Lan5g0210 805 Pfam Putative GTPase activating protein for Arf 12 122 IPR001164 GO:0005096
Lan5g0210 805 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD14-RELATED 437 805 - -
Lan5g0210 805 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD14-RELATED 1 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0210 Lan-Chr5 2573163 2582701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0210 14 116 C2H2 Transcription Factor Family AT4G05330 32.456 6.03e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0210 K15044 - gmx:100788316 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0210 5 2573163 2582701 Lan20g1433 20 20992043 21013626 LSH