Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0202 ATGAGACAATTTTACTTTTATCTTTTGGTTCTTTCTTTCTTTGTGTTCATTCCAAAAACTCATGAGCTAGAACAAGGTGAGACACAAGTGTTGTTACAATTAAGGAATTATTTAGAGTACCCTTCATCTTTGCAAATTTGGGAAAATTACTATTGGGACCTATGTAGTGTTCCTTCATCTGCATACATGAGCATTAAATGTCAGGATAATGTAGTAACTGAGCTTAAAATTATGGGAGATAAATCATTGAAGCCATCATCAAGGTTCAGTGGATTCACTGTTCCAAATAAGACACTATCTATGAATTTCACCATTGATTCATTTTTCACCACTTTGACAAGGTTAACAAGCTTAAGAGTTCTTAACTTGGTGTCTTTGGGGCTTTGGGGGGAATTACCTGATATGATTCATAGGTTGTCTTTGCTTGAAGTTTTGGACTTGAGCTCAAATTTCTTGTTTGGTGCTATCCCTCCAAGAATGTCGAAAATGGTAAAGCTTCATACACTAGCACTCGATGACAATTATTTTAATACCACTATGCCGGATTGGTTTGATTCATTGTCTAATCTAAGTGTGTTGAGTTTGAAGAGTAACTACTTAAAGGGTTCATTCCCCTCATCACTATGCAAAATTAAGTCACTTGAAGTTATTTCCTTGTCACACAATCAGCTTTCTGGTGGATTGCCTAGTCTCAGTAATCTCACTGGCTTACATGTTTTGGACTTGAGAGAAAATCATTTAGATTCTGAGCTACCGACTTTGCCGAAAGCAGTAGTCACTGTTCTTATGAGCAACAACTCATTCTCAGGAGAGATTCCGAGGCAGTTTAGAGAATTGAGTCAGCTTCAACACCTAGATCTTTCATCGAACCATCTCAGTGGGGTACCCCTATCTGCATTGTTCTCTTTGCCAAGCATAAGTTATTTGAATCTAGCAAGAAATGTGCTGAGTGGTTCCCTTGTGGAAAAACTAAGTTGCGGCAGCGAACTCGGGTTTGTGGATATTTCTGGCAACAAGTTACATGGTGGACTTCCTTCTTGCTTGGCCAACACTTCTGGTAGAAGAGTTGTTAAATATGGTGGAAATTGTTTATCTGTCGAGTCTCAGCCTCAAGGACGACGGTCTTATTGTAAAGAGTCCAGTTCGGTATGGAAAAAATTCAAGGCATGGGAAATAGCTGCAGCTGTGGCCATTATCGTTGTACTTGTTATTGTGATTTTGGTGTTCGGAATTTACTTATGCAAAAAAATTCATTTGAGAAAGACAACTGAGGAGGTTGTGTTGCCTAAGCTTGTCCAAGATAACTCCACAACAAGGACAGGGGTTTCATCCGAAATCCTTGCAAGTGCTAGACTTATTTCACAAGCAATGAAGCTAGGGACACAATCTACTCCAAGTTGTCGACAGATTTCAATCGAAGAACTGAAGGAGGCCACAAAAAACTTTGACATGTCAACTTATATTGGTGGAGGCTCCATAGGGAAGCTATACAAAGGTAAACTAGAGAACGGTTCCTCCGTGATCATACGATCTCTGGCTCTGTCAAAGAAATGCTCAATTCAAAATCTTAAATCTCGTCTGGATTTACTCTCAAAGCTTCAACATCCAAATTTGGTTAGCCTCTTGGGCCATTGTATTGATGCTGCACAAGATAATTACACTAACCACAAACTTCATCTTGTATATGAGTACATGCCGAATGGGAATTATCGTACCTATCTGTCAGAATTCACTACAGGGAAAGCACTTAAGTGGTCCGATAGATTGGCAATTTTAATTGGAGTCGCCAAGGCTGTGCATTTCTTACATACCGGTGTTATACCAGGTTGTTTTAGTAACCAATTAAAGACAAAAAATGTTTTACTTGACGAGCACCGCATCCCAAAACTAAGTGACTATGGCATGTCTATCATCACAGAAGAGATCGAAAAGTTTGAGGCAAAGGGAGAGAAACCAAAATCATGCCAAGGAACGAAATTGGGGGATGATGTTTATAATTTTGGATTCATATTGCTCGAATCACTTGTCGGACCGGTAGCAAGTGATAAAGGAGAAACATTTTTCCTAAATGAAAAGGCATCATTTGACAGTCAAGATGGTAGAAAAAAGATTGTAGATCCTATAGTGTTAACAACATGCTCTCAAGAATCATTATCAATTGCGATATCTATAACAACAAAATGCATATCTCCGGATTCGGCATCTCGTCCTTCTTTCGAAGATGTCTTATGGAACTTACAATATGCAGCTCAAGTGCAAGCCACAGCAGATGCAGATCAGAAATCAGATTCTCCATCATAG 2301 0.3903 MRQFYFYLLVLSFFVFIPKTHELEQGETQVLLQLRNYLEYPSSLQIWENYYWDLCSVPSSAYMSIKCQDNVVTELKIMGDKSLKPSSRFSGFTVPNKTLSMNFTIDSFFTTLTRLTSLRVLNLVSLGLWGELPDMIHRLSLLEVLDLSSNFLFGAIPPRMSKMVKLHTLALDDNYFNTTMPDWFDSLSNLSVLSLKSNYLKGSFPSSLCKIKSLEVISLSHNQLSGGLPSLSNLTGLHVLDLRENHLDSELPTLPKAVVTVLMSNNSFSGEIPRQFRELSQLQHLDLSSNHLSGVPLSALFSLPSISYLNLARNVLSGSLVEKLSCGSELGFVDISGNKLHGGLPSCLANTSGRRVVKYGGNCLSVESQPQGRRSYCKESSSVWKKFKAWEIAAAVAIIVVLVIVILVFGIYLCKKIHLRKTTEEVVLPKLVQDNSTTRTGVSSEILASARLISQAMKLGTQSTPSCRQISIEELKEATKNFDMSTYIGGGSIGKLYKGKLENGSSVIIRSLALSKKCSIQNLKSRLDLLSKLQHPNLVSLLGHCIDAAQDNYTNHKLHLVYEYMPNGNYRTYLSEFTTGKALKWSDRLAILIGVAKAVHFLHTGVIPGCFSNQLKTKNVLLDEHRIPKLSDYGMSIITEEIEKFEAKGEKPKSCQGTKLGDDVYNFGFILLESLVGPVASDKGETFFLNEKASFDSQDGRKKIVDPIVLTTCSQESLSIAISITTKCISPDSASRPSFEDVLWNLQYAAQVQATADADQKSDSPS* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0202 766 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 2 763 - -
Lan5g0202 766 SMART LRR_typ_2 187 211 IPR003591 -
Lan5g0202 766 SMART LRR_typ_2 234 257 IPR003591 -
Lan5g0202 766 SMART LRR_typ_2 279 303 IPR003591 -
Lan5g0202 766 SMART LRR_typ_2 139 163 IPR003591 -
Lan5g0202 766 ProSiteProfiles Leucine-rich repeat profile. 281 301 IPR001611 GO:0005515
Lan5g0202 766 Gene3D Ribonuclease Inhibitor 24 256 IPR032675 -
Lan5g0202 766 Pfam GRB2-binding adapter (GAPT) 393 482 IPR021082 GO:0016021
Lan5g0202 766 ProSiteProfiles Protein kinase domain profile. 482 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0202 766 PANTHER OS07G0166700 PROTEIN 2 763 IPR045272 GO:0004714|GO:0006468
Lan5g0202 766 ProSiteProfiles Leucine-rich repeat profile. 213 235 IPR001611 GO:0005515
Lan5g0202 766 Pfam Protein tyrosine and serine/threonine kinase 484 743 IPR001245 GO:0004672|GO:0006468
Lan5g0202 766 Gene3D Transferase(Phosphotransferase) domain 1 565 765 - -
Lan5g0202 766 Gene3D Phosphorylase Kinase; domain 1 443 564 - -
Lan5g0202 766 Gene3D Ribonuclease Inhibitor 257 384 IPR032675 -
Lan5g0202 766 SUPERFAMILY L domain-like 92 364 - -
Lan5g0202 766 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Lan5g0202 766 Pfam Leucine rich repeat 263 316 IPR001611 GO:0005515
Lan5g0202 766 SUPERFAMILY Protein kinase-like (PK-like) 462 746 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0202 Lan-Chr5 2427084 2432265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0202 8 691 Miscellaneous Gene Families AT5G14210 57.781 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lan5g0202 PK_Tyr_Ser-Thr 6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0202 - - gmx:100799183 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0202 5 2427084 2432265 Lan5g0202 5 2427084 2432265 ECH
Lan10g0764 10 10270503 10276315 Lan5g0202 5 2427084 2432265 LSH
Lan5g0202 5 2427084 2432265 Lan3g0619 3 7617147 7627870 LSH