Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0200 ATGGAGAACAAAACAATAACAATGGACCCAAAGAGCGGTTTCAACCATTCTTCTAGAACATTCCACAGTCTCAAACCCCCTCTCAACCTCCCTCCTCCACACATTCCCATTTCCGCCGCCACCTACGCCCTCTCCCTCCGCCGCCACTCTCCCTTCCCCGACTCACTCACCGCCCTCATCGACTCCGCCACCGGTAACCACCTCTCCTTTTCCGATTTCATCCAACGCGCCCAAACCCTAGCCACCAACCTCACCTCCATTCTCAAACTCTCCAAAGGCGACACCGCACTCATTCTCTCACCTAACCTTATCAACATCCCGATCCTCTGCTTCGCGCTCCTCTCTATCGGCGTGGTCATCTCTCCCGCGAATCCAGCTTCCACGCGCTCAGAGCTCACGCGCCTCGTTCGTATTTCCAAACCTATCATCGCTTTTGCCACGTCAGCATACGCTGATGAAATCCCGGAGGTGAAACTCGGTACGGTTGTTATCGACTCGGAGGAGTTTGAGTCGCTGGTGATGATGACTCGACCAGGAGTTCGACTCGGGCGAGTTGAGGTGAGTCAATCTGACGTGGCAGCGATCCTGTATTCGTCCGGAACAACGGGGAATGTGAAGGGAGTGATGTTGACGCATCGGAATCTTATAGCGTTAGTAGGTGTATACGACGCCGTTCGAGTGAAGAGAGAGGAACCTGCGGTGTTTCTTTATACGATGCCGTTTTTTCACGTGTACGGTTTTACGTTTAGTTTGAGGGCGTTGGTTTTGTCGGACACGGTGGTGATTATGGAGAGGTTTACTTTGAGGAGGATGCTGAGCGCGGTAGAGAGGTTTCGCGTGACGCACCTTGCGGTGGTGCCGCCGTTGGTTGTGGCAATGACGAAAGACGGTGTGACGGAGGGGTATGATTTAAGGTCGTTGCAAGGTGTTGCTTGTGGTGCAGCTCCGCTTGGAAAGGATACCGTTGCGGCTTTCAAATTCAAATTTCCTGGAGTAGTCATCATCCAGGGATACGGATTAACTGAATCAACTGCCGGGATTGTCCGAACTATGACGGCGGAGGAAACGAGCCGGCCTGGAACAACAGGTAGACTAGTACCGGGGGTGGAAGCCAAAATTGTGAACCCAAACACAGGTGAAGCAATGTCTCCTAGTGAACAAGGTGAACTGTGGATCAGAGGACCTTCCATTATGAAAGGTTATGCTGGTGATCCTGAAGCAACTTCTGCAACTTTGGTGGATGGGTGGTTAAGGACCGGGGACCTATGTTATTTCGATGATGATGGTTTCATGTATGTTGTAGACAGGTTGAAAGAGCTCATCAAATACAAGGGCTACCAGGTGGCCCCTGCAGAATTAGAACAGTTACTCCTAAGCCACCCAGAGATAAACGATGCCGCAGTTATTCCGTACCCTGATGAAGAAGCTGGTGAGGTGCCAATGGCTTTTGTTGTAAGACAGCCCCAAAGTTCCCTTGGCGAAGCAGAAATTATTGATTTTGTTGCCAAACAGGTTGCACCATACAAGAAAATAAGGCGTGTAGCATTTATAGAATCAATACCAAAGAATGCAGCAGGAAAGATATTGAGGAAAGATTTAAACAAAATTGCTCTCCAAAGATCTTTCTCTAAGCTATAA 1638 0.4988 MENKTITMDPKSGFNHSSRTFHSLKPPLNLPPPHIPISAATYALSLRRHSPFPDSLTALIDSATGNHLSFSDFIQRAQTLATNLTSILKLSKGDTALILSPNLINIPILCFALLSIGVVISPANPASTRSELTRLVRISKPIIAFATSAYADEIPEVKLGTVVIDSEEFESLVMMTRPGVRLGRVEVSQSDVAAILYSSGTTGNVKGVMLTHRNLIALVGVYDAVRVKREEPAVFLYTMPFFHVYGFTFSLRALVLSDTVVIMERFTLRRMLSAVERFRVTHLAVVPPLVVAMTKDGVTEGYDLRSLQGVACGAAPLGKDTVAAFKFKFPGVVIIQGYGLTESTAGIVRTMTAEETSRPGTTGRLVPGVEAKIVNPNTGEAMSPSEQGELWIRGPSIMKGYAGDPEATSATLVDGWLRTGDLCYFDDDGFMYVVDRLKELIKYKGYQVAPAELEQLLLSHPEINDAAVIPYPDEEAGEVPMAFVVRQPQSSLGEAEIIDFVAKQVAPYKKIRRVAFIESIPKNAAGKILRKDLNKIALQRSFSKL* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0200 545 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 9 539 - -
Lan5g0200 545 Gene3D - 29 438 IPR042099 -
Lan5g0200 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 539 - -
Lan5g0200 545 SUPERFAMILY Acetyl-CoA synthetase-like 46 539 - -
Lan5g0200 545 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Lan5g0200 545 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Lan5g0200 545 Gene3D - 439 541 IPR045851 -
Lan5g0200 545 CDD 4CL 50 533 - -
Lan5g0200 545 Pfam AMP-binding enzyme 55 443 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0200 Lan-Chr5 2406029 2412124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0200 3 545 Monolignol Biosynthesis Gene Families AT5G63380 51.515 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0200 - - gmx:100801143 769.615