Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0192 ATGCCAAGCGTGGCCGTTAAACTATACAGTGTCTTCTTTAAGTTCCTCTTAAAACAACGTTTACAAAATCGGATCCAATCCAATCCCCAACAACCCGACCCGTTTGGTATCACTTCTCGACCCGATGAATCCGTCGCTAATTCCAACCCTTCTTTCTCTGATGGCGTCGCTACCAAAGATATCCACATCGATCCCTTCACTTCTCTCTCTATTCGTATCTTTCTCCCTGATTCCGCACTCTCCAAACCTGATTCCAAACCTAATACGAACCCCAACCTGGATTCTGATTTGCATGTTTTGCGTAGGAACAGTTATGGTTTTTCCGGTGATGTGGAATCGAGGGGTGAAGAGGAATCTTCTAGAAGGAATAGTATTGGTGAGGGTTTGAGTAGTTATAAGGGTTATTCTCCGGCGATGGATAATCGCCGGAAAAAGCTTCCGGTGATGTTGCAGTTTCATGGAGGGGGTTGGGTGAGTGGGAGTAATGATTCGGTGGCGAATGATTTCTTCTGTAGGAGAATTGCGAGGTTGTGTGATGTGATTGTTGTGGCGGTTGGGTACCGGTTGGCGCCTGAGAATCGGTATCCGGCCGCGTTCGAGGATGGGATGAAGGTGTTGAGTTGGTTGGCGAAACAGGCGAATTTGGCTGAGTGTAGTAAGTCAATGGGGGTTAAGAAATTGGATGCTCATAATAGGCATATTGTTGATACATTTGGTGGTGCTTCAATGGTGGAACCATGGTTGGCTGCTCATGGAAATCTATCAAGGTGTGTTCTTCTTGGTGTTAGTTGTGGTGCAAATATTGCAGACTATGTGGCTCGAAAAGCAGTAGAAGCAGGCAAACATCTGGACCCGGTAAAGGTGGTGGCACAGGTCCTGATGTATCCATTTTTTGTTGGAAGTGTGCCCACTCGGTCTGAAATAAAGTTGGCCAACTCTTATTTTTATGACAAGGCTATGTGTATGCTCGCGTGGAAACTTTTCCTACCTGAAGAAGAATTTAGCCTGGACCATCCAGCCGCCAATCCCCTAGTCCCAGGTCGGGGTCCTCCATTAAAGTCGATGCCTCCAACAATGACAGTAGTGGCTGAACATGACTGGATGAGGGACCGTGCCATTGCTTACTCAGAGGAACTCAGGAAGGTGAATGTCGATGCACCCGTTCTTGAGTACAAGGATGCGGTTCACGAATTTGCAACACTTGACATTCTTCTCAAAACCCCTCAGGCTCAGGTTTGTGCTGAGGACATTGCCATCTGGGTCAAGAAGTATATTTCGCTTCGAGGTCACGAATTCTCATATTGA 1305 0.469 MPSVAVKLYSVFFKFLLKQRLQNRIQSNPQQPDPFGITSRPDESVANSNPSFSDGVATKDIHIDPFTSLSIRIFLPDSALSKPDSKPNTNPNLDSDLHVLRRNSYGFSGDVESRGEEESSRRNSIGEGLSSYKGYSPAMDNRRKKLPVMLQFHGGGWVSGSNDSVANDFFCRRIARLCDVIVVAVGYRLAPENRYPAAFEDGMKVLSWLAKQANLAECSKSMGVKKLDAHNRHIVDTFGGASMVEPWLAAHGNLSRCVLLGVSCGANIADYVARKAVEAGKHLDPVKVVAQVLMYPFFVGSVPTRSEIKLANSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPLVPGRGPPLKSMPPTMTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDILLKTPQAQVCAEDIAIWVKKYISLRGHEFSY* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0192 434 MobiDBLite consensus disorder prediction 25 55 - -
Lan5g0192 434 Gene3D alpha/beta hydrolase 35 429 IPR029058 -
Lan5g0192 434 Pfam alpha/beta hydrolase fold 149 399 IPR013094 GO:0016787
Lan5g0192 434 MobiDBLite consensus disorder prediction 25 57 - -
Lan5g0192 434 MobiDBLite consensus disorder prediction 108 128 - -
Lan5g0192 434 PANTHER ARYLACETAMIDE DEACETYLASE 22 414 - -
Lan5g0192 434 SUPERFAMILY alpha/beta-Hydrolases 45 425 IPR029058 -
Lan5g0192 434 PANTHER CARBOXYLESTERASE 16-RELATED 22 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0192 Lan-Chr5 2315180 2320089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0192 1 434 Carbohydrate Esterase AT3G27320 74.157 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0192 - - gmx:100809142 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0192 5 2315180 2320089 Lan5g0192 5 2315180 2320089 ECH
Lan5g0192 5 2315180 2320089 Lan20g1402 20 20706771 20710839 LSH